Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
FGD4Q96M96 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
FGD4Q96M96 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.23■□□□□ 0.99
FGD4Q96M96 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
FGD4Q96M96 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FGD4Q96M96 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.22■□□□□ 0.99
FGD4Q96M96 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FGD4Q96M96 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FGD4Q96M96 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FGD4Q96M96 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FGD4Q96M96 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FGD4Q96M96 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.22■□□□□ 0.99
FGD4Q96M96 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FGD4Q96M96 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.22■□□□□ 0.99
FGD4Q96M96 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.22■□□□□ 0.99
FGD4Q96M96 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.22■□□□□ 0.99
FGD4Q96M96 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FGD4Q96M96 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.22■□□□□ 0.99
FGD4Q96M96 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.22■□□□□ 0.99
FGD4Q96M96 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.22■□□□□ 0.99
FGD4Q96M96 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.22■□□□□ 0.99
FGD4Q96M96 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.22■□□□□ 0.99
FGD4Q96M96 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.22■□□□□ 0.99
FGD4Q96M96 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
FGD4Q96M96 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
FGD4Q96M96 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FGD4Q96M96 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.22■□□□□ 0.99
FGD4Q96M96 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.22■□□□□ 0.99
FGD4Q96M96 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
FGD4Q96M96 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
FGD4Q96M96 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FGD4Q96M96 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.21■□□□□ 0.99
FGD4Q96M96 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
FGD4Q96M96 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.21■□□□□ 0.99
FGD4Q96M96 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
FGD4Q96M96 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.21■□□□□ 0.99
FGD4Q96M96 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
FGD4Q96M96 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
FGD4Q96M96 TSPY22P-201ENST00000427496 604 ntBASIC21.21■□□□□ 0.99
FGD4Q96M96 CHCHD2P8-201ENST00000429873 447 ntBASIC21.21■□□□□ 0.99
FGD4Q96M96 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.21■□□□□ 0.99
FGD4Q96M96 PRELID1P1-202ENST00000567272 903 ntBASIC21.21■□□□□ 0.99
FGD4Q96M96 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.21■□□□□ 0.99
FGD4Q96M96 RN7SL510P-201ENST00000581311 263 ntBASIC21.21■□□□□ 0.99
FGD4Q96M96 AL691432.3-201ENST00000621860 400 ntBASIC21.21■□□□□ 0.99
FGD4Q96M96 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.21■□□□□ 0.99
FGD4Q96M96 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
FGD4Q96M96 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
FGD4Q96M96 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.21■□□□□ 0.99
FGD4Q96M96 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
FGD4Q96M96 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
FGD4Q96M96 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FGD4Q96M96 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
FGD4Q96M96 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
FGD4Q96M96 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.2■□□□□ 0.98
FGD4Q96M96 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.2■□□□□ 0.98
FGD4Q96M96 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.2■□□□□ 0.98
FGD4Q96M96 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.2■□□□□ 0.98
FGD4Q96M96 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
FGD4Q96M96 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.2■□□□□ 0.98
FGD4Q96M96 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.2■□□□□ 0.98
FGD4Q96M96 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.2■□□□□ 0.98
FGD4Q96M96 TPSP2-201ENST00000561760 610 ntBASIC21.2■□□□□ 0.98
FGD4Q96M96 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.2■□□□□ 0.98
FGD4Q96M96 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.2■□□□□ 0.98
FGD4Q96M96 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.2■□□□□ 0.98
FGD4Q96M96 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.2■□□□□ 0.98
FGD4Q96M96 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.2■□□□□ 0.98
FGD4Q96M96 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FGD4Q96M96 KRT8P7-201ENST00000533003 1432 ntBASIC21.2■□□□□ 0.98
FGD4Q96M96 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.2■□□□□ 0.98
FGD4Q96M96 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FGD4Q96M96 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
FGD4Q96M96 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FGD4Q96M96 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
FGD4Q96M96 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.19■□□□□ 0.98
FGD4Q96M96 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms