Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC26.22■■□□□ 1.79
USP47Q96K76 AC024243.1-201ENST00000609234 778 ntBASIC26.22■■□□□ 1.79
USP47Q96K76 AC112497.1-201ENST00000624824 639 ntBASIC26.22■■□□□ 1.79
USP47Q96K76 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
USP47Q96K76 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP47Q96K76 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP47Q96K76 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USP47Q96K76 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP47Q96K76 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USP47Q96K76 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC26.21■■□□□ 1.79
USP47Q96K76 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC26.21■■□□□ 1.79
USP47Q96K76 AC063952.2-201ENST00000498792 1227 ntBASIC26.21■■□□□ 1.79
USP47Q96K76 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC26.21■■□□□ 1.79
USP47Q96K76 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
USP47Q96K76 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
USP47Q96K76 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
USP47Q96K76 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC26.21■■□□□ 1.79
USP47Q96K76 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
USP47Q96K76 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC26.21■■□□□ 1.79
USP47Q96K76 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
USP47Q96K76 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
USP47Q96K76 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.79
USP47Q96K76 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC26.2■■□□□ 1.79
USP47Q96K76 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
USP47Q96K76 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
USP47Q96K76 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
USP47Q96K76 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC26.2■■□□□ 1.79
USP47Q96K76 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
USP47Q96K76 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC26.2■■□□□ 1.79
USP47Q96K76 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
USP47Q96K76 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
USP47Q96K76 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC26.2■■□□□ 1.79
USP47Q96K76 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC26.2■■□□□ 1.79
USP47Q96K76 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
USP47Q96K76 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
USP47Q96K76 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
USP47Q96K76 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP47Q96K76 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
USP47Q96K76 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC26.2■■□□□ 1.78
USP47Q96K76 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC26.2■■□□□ 1.78
USP47Q96K76 KRT18P38-201ENST00000449496 1282 ntBASIC26.2■■□□□ 1.78
USP47Q96K76 TPM1-226ENST00000560959 925 ntTSL 2 BASIC26.2■■□□□ 1.78
USP47Q96K76 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC26.19■■□□□ 1.78
USP47Q96K76 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC26.19■■□□□ 1.78
USP47Q96K76 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC26.19■■□□□ 1.78
USP47Q96K76 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
USP47Q96K76 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC26.19■■□□□ 1.78
USP47Q96K76 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
USP47Q96K76 GAD2-202ENST00000376248 680 ntTSL 5 BASIC26.19■■□□□ 1.78
USP47Q96K76 RNF152P1-201ENST00000397754 604 ntBASIC26.19■■□□□ 1.78
USP47Q96K76 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
USP47Q96K76 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC26.19■■□□□ 1.78
USP47Q96K76 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
USP47Q96K76 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC26.19■■□□□ 1.78
USP47Q96K76 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
USP47Q96K76 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC26.19■■□□□ 1.78
USP47Q96K76 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
USP47Q96K76 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
USP47Q96K76 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USP47Q96K76 KRT8P7-201ENST00000533003 1432 ntBASIC26.18■■□□□ 1.78
USP47Q96K76 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC26.18■■□□□ 1.78
USP47Q96K76 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC26.18■■□□□ 1.78
USP47Q96K76 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP47Q96K76 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC26.18■■□□□ 1.78
USP47Q96K76 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP47Q96K76 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
USP47Q96K76 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC26.18■■□□□ 1.78
USP47Q96K76 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC26.18■■□□□ 1.78
USP47Q96K76 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USP47Q96K76 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC26.18■■□□□ 1.78
USP47Q96K76 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USP47Q96K76 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
USP47Q96K76 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC26.18■■□□□ 1.78
USP47Q96K76 RNF146-204ENST00000476956 884 ntTSL 2 BASIC26.18■■□□□ 1.78
USP47Q96K76 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC26.18■■□□□ 1.78
USP47Q96K76 AC104390.1-201ENST00000555663 520 ntBASIC26.18■■□□□ 1.78
USP47Q96K76 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
USP47Q96K76 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USP47Q96K76 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
USP47Q96K76 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms