Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS1Q92902 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS1Q92902 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS1Q92902 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
HPS1Q92902 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS1Q92902 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HPS1Q92902 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
HPS1Q92902 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HPS1Q92902 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS1Q92902 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.1■□□□□ 0.33
HPS1Q92902 UBE2SP1-201ENST00000450587 669 ntBASIC17.1■□□□□ 0.33
HPS1Q92902 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS1Q92902 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.1■□□□□ 0.33
HPS1Q92902 C2orf69P4-201ENST00000565394 541 ntBASIC17.1■□□□□ 0.33
HPS1Q92902 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS1Q92902 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HPS1Q92902 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS1Q92902 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HPS1Q92902 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.1■□□□□ 0.33
HPS1Q92902 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 AC092368.3-202ENST00000574180 1591 ntBASIC17.1■□□□□ 0.33
HPS1Q92902 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HPS1Q92902 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.1■□□□□ 0.33
HPS1Q92902 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HPS1Q92902 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HPS1Q92902 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.09■□□□□ 0.33
HPS1Q92902 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.09■□□□□ 0.33
HPS1Q92902 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS1Q92902 RPS2P4-201ENST00000476944 856 ntBASIC17.09■□□□□ 0.33
HPS1Q92902 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
HPS1Q92902 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.09■□□□□ 0.33
HPS1Q92902 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.09■□□□□ 0.33
HPS1Q92902 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.09■□□□□ 0.33
HPS1Q92902 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 AL391005.1-201ENST00000623953 2435 ntBASIC17.09■□□□□ 0.33
HPS1Q92902 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
HPS1Q92902 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HPS1Q92902 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS1Q92902 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HPS1Q92902 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS1Q92902 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.08■□□□□ 0.33
HPS1Q92902 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS1Q92902 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS1Q92902 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS1Q92902 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
HPS1Q92902 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.08■□□□□ 0.33
HPS1Q92902 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS1Q92902 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HPS1Q92902 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
HPS1Q92902 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HPS1Q92902 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
HPS1Q92902 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HPS1Q92902 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HPS1Q92902 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HPS1Q92902 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.08■□□□□ 0.32
HPS1Q92902 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms