Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT9Q92600 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 KRT8P32-201ENST00000512863 1461 ntBASIC17.29■□□□□ 0.36
CNOT9Q92600 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CNOT9Q92600 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CNOT9Q92600 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.29■□□□□ 0.36
CNOT9Q92600 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT9Q92600 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.28■□□□□ 0.36
CNOT9Q92600 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.28■□□□□ 0.36
CNOT9Q92600 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.28■□□□□ 0.36
CNOT9Q92600 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT9Q92600 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNOT9Q92600 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.28■□□□□ 0.36
CNOT9Q92600 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT9Q92600 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.28■□□□□ 0.36
CNOT9Q92600 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
CNOT9Q92600 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CNOT9Q92600 AC068587.9-201ENST00000641814 219 ntBASIC17.28■□□□□ 0.36
CNOT9Q92600 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.28■□□□□ 0.36
CNOT9Q92600 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT9Q92600 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT9Q92600 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNOT9Q92600 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.28■□□□□ 0.36
CNOT9Q92600 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT9Q92600 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT9Q92600 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT9Q92600 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CNOT9Q92600 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT9Q92600 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT9Q92600 AC009113.1-201ENST00000570267 2443 ntBASIC17.27■□□□□ 0.36
CNOT9Q92600 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT9Q92600 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.27■□□□□ 0.36
CNOT9Q92600 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT9Q92600 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
CNOT9Q92600 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CNOT9Q92600 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.27■□□□□ 0.36
CNOT9Q92600 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CNOT9Q92600 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT9Q92600 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.27■□□□□ 0.36
CNOT9Q92600 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT9Q92600 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT9Q92600 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.27■□□□□ 0.36
CNOT9Q92600 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.27■□□□□ 0.36
CNOT9Q92600 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT9Q92600 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT9Q92600 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.27■□□□□ 0.36
CNOT9Q92600 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.27■□□□□ 0.36
CNOT9Q92600 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.27■□□□□ 0.36
CNOT9Q92600 SLC25A1P4-201ENST00000567977 778 ntBASIC17.27■□□□□ 0.36
CNOT9Q92600 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
CNOT9Q92600 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.27■□□□□ 0.36
CNOT9Q92600 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT9Q92600 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNOT9Q92600 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT9Q92600 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CNOT9Q92600 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNOT9Q92600 MTMR9LP-203ENST00000426597 1545 ntBASIC17.26■□□□□ 0.35
CNOT9Q92600 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT9Q92600 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.26■□□□□ 0.35
CNOT9Q92600 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT9Q92600 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.26■□□□□ 0.35
CNOT9Q92600 AC005082.1-201ENST00000413042 2259 ntBASIC17.26■□□□□ 0.35
CNOT9Q92600 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNOT9Q92600 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT9Q92600 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CNOT9Q92600 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.26■□□□□ 0.35
CNOT9Q92600 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.26■□□□□ 0.35
CNOT9Q92600 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT9Q92600 REXO1L10P-201ENST00000615707 1290 ntBASIC17.26■□□□□ 0.35
CNOT9Q92600 REXO1L12P-201ENST00000622156 912 ntBASIC17.26■□□□□ 0.35
CNOT9Q92600 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT9Q92600 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.26■□□□□ 0.35
CNOT9Q92600 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CNOT9Q92600 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT9Q92600 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT9Q92600 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT9Q92600 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT9Q92600 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNOT9Q92600 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms