Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 AP005242.2-201ENST00000580065 1175 ntBASIC18.99■□□□□ 0.63
PTCD2Q8WV60 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 AC145285.6-201ENST00000604632 637 ntBASIC18.99■□□□□ 0.63
PTCD2Q8WV60 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 WIZP1-201ENST00000531444 2299 ntBASIC18.99■□□□□ 0.63
PTCD2Q8WV60 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTCD2Q8WV60 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 KRT8P32-201ENST00000512863 1461 ntBASIC18.98■□□□□ 0.63
PTCD2Q8WV60 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 LINC01568-207ENST00000641790 1380 ntBASIC18.98■□□□□ 0.63
PTCD2Q8WV60 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 NAPSB-206ENST00000562112 1266 ntBASIC18.98■□□□□ 0.63
PTCD2Q8WV60 CKBP1-201ENST00000565489 1086 ntBASIC18.98■□□□□ 0.63
PTCD2Q8WV60 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 AC068587.9-201ENST00000641814 219 ntBASIC18.98■□□□□ 0.63
PTCD2Q8WV60 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTCD2Q8WV60 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 MFAP1P1-201ENST00000442257 1255 ntBASIC18.97■□□□□ 0.63
PTCD2Q8WV60 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.97■□□□□ 0.63
PTCD2Q8WV60 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 FAM210CP-201ENST00000445714 574 ntBASIC18.96■□□□□ 0.63
PTCD2Q8WV60 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PTCD2Q8WV60 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms