Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 CNN2P11-201ENST00000429351 262 ntBASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 MIR5100-201ENST00000579544 119 ntBASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC168Q8NDH2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 GUSBP12-201ENST00000513727 720 ntBASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 GPR32P1-201ENST00000601788 811 ntBASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 IGHV3-41-201ENST00000613121 348 ntBASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC168Q8NDH2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC168Q8NDH2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 AP003733.1-201ENST00000491725 852 ntBASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.6■□□□□ 0.09
CCDC168Q8NDH2 AC024563.2-201ENST00000603282 481 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms