Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 AL031598.1-201ENST00000561511 1773 ntBASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC01555Q8NAE3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 AL441883.1-201ENST00000566170 1045 ntBASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01555Q8NAE3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LINC01555Q8NAE3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01555Q8NAE3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.02■□□□□ 0.47
LINC01555Q8NAE3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.02■□□□□ 0.47
LINC01555Q8NAE3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01555Q8NAE3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.02■□□□□ 0.47
LINC01555Q8NAE3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.02■□□□□ 0.47
LINC01555Q8NAE3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.02■□□□□ 0.47
LINC01555Q8NAE3 AC034236.2-201ENST00000606662 1610 ntBASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 AL499627.1-201ENST00000569373 2188 ntBASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 AC093503.3-201ENST00000624917 2352 ntBASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
LINC01555Q8NAE3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 HOXB1-202ENST00000577092 1414 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 ANKRD20A18P-201ENST00000359341 492 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 AP000523.1-201ENST00000398242 1049 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 AK4P3-201ENST00000418260 669 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 KRT18P23-201ENST00000435622 1283 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 DUX4L26-201ENST00000489078 1255 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 GCSHP2-201ENST00000560971 527 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 AC024243.1-201ENST00000609234 778 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01555Q8NAE3 AC112497.1-201ENST00000624824 639 ntBASIC18■□□□□ 0.47
LINC01555Q8NAE3 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18■□□□□ 0.47
LINC01555Q8NAE3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms