Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SIX5Q8N196 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SIX5Q8N196 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SIX5Q8N196 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.16■□□□□ 0.66
SIX5Q8N196 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SIX5Q8N196 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
SIX5Q8N196 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 AP003733.1-201ENST00000491725 852 ntBASIC19.16■□□□□ 0.66
SIX5Q8N196 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 AP001005.1-201ENST00000571755 1248 ntBASIC19.16■□□□□ 0.66
SIX5Q8N196 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SIX5Q8N196 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SIX5Q8N196 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SIX5Q8N196 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.16■□□□□ 0.66
SIX5Q8N196 AC026310.3-201ENST00000625186 2373 ntBASIC19.15■□□□□ 0.66
SIX5Q8N196 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.15■□□□□ 0.66
SIX5Q8N196 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.15■□□□□ 0.66
SIX5Q8N196 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SIX5Q8N196 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.15■□□□□ 0.66
SIX5Q8N196 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 AC007952.6-201ENST00000573168 2673 ntBASIC19.15■□□□□ 0.66
SIX5Q8N196 AC003957.1-201ENST00000625108 2673 ntBASIC19.15■□□□□ 0.66
SIX5Q8N196 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SIX5Q8N196 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.15■□□□□ 0.66
SIX5Q8N196 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.15■□□□□ 0.66
SIX5Q8N196 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.15■□□□□ 0.66
SIX5Q8N196 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.15■□□□□ 0.66
SIX5Q8N196 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SIX5Q8N196 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
SIX5Q8N196 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SIX5Q8N196 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SIX5Q8N196 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
SIX5Q8N196 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.15■□□□□ 0.66
SIX5Q8N196 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SIX5Q8N196 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SIX5Q8N196 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.15■□□□□ 0.66
SIX5Q8N196 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.15■□□□□ 0.66
SIX5Q8N196 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SIX5Q8N196 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.14■□□□□ 0.66
SIX5Q8N196 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SIX5Q8N196 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SIX5Q8N196 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.14■□□□□ 0.65
SIX5Q8N196 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.14■□□□□ 0.65
SIX5Q8N196 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.14■□□□□ 0.65
SIX5Q8N196 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SIX5Q8N196 AC092865.5-201ENST00000545435 363 ntBASIC19.14■□□□□ 0.65
SIX5Q8N196 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.14■□□□□ 0.65
SIX5Q8N196 AL390719.2-201ENST00000606993 987 ntBASIC19.14■□□□□ 0.65
SIX5Q8N196 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.14■□□□□ 0.65
SIX5Q8N196 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SIX5Q8N196 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SIX5Q8N196 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.14■□□□□ 0.65
SIX5Q8N196 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SIX5Q8N196 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms