Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
TRIM48Q8IWZ4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 AC117947.1-201ENST00000427448 529 ntBASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 AC092647.4-201ENST00000457211 535 ntBASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 AL031432.5-201ENST00000641059 760 ntBASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM48Q8IWZ4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 YBX1P2-201ENST00000489612 999 ntBASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 KRT18P35-201ENST00000510488 1269 ntBASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 AL445228.2-201ENST00000605589 952 ntBASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 KRT8P3-201ENST00000519669 1449 ntBASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM48Q8IWZ4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 RNF152P1-201ENST00000397754 604 ntBASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 AC009947.2-201ENST00000444014 672 ntBASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 MCCD1P1-208ENST00000445732 328 ntBASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 MIR4674-201ENST00000582457 87 ntBASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 AC008622.2-201ENST00000617006 1229 ntBASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 AC141586.3-201ENST00000562166 1838 ntBASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRIM48Q8IWZ4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM48Q8IWZ4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms