Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.52■■□□□ 1.36
COL23A1Q86Y22 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC23.52■■□□□ 1.36
COL23A1Q86Y22 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC23.52■■□□□ 1.36
COL23A1Q86Y22 AC145285.3-201ENST00000564603 959 ntBASIC23.52■■□□□ 1.36
COL23A1Q86Y22 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.52■■□□□ 1.36
COL23A1Q86Y22 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL23A1Q86Y22 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL23A1Q86Y22 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.52■■□□□ 1.36
COL23A1Q86Y22 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL23A1Q86Y22 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL23A1Q86Y22 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.51■■□□□ 1.35
COL23A1Q86Y22 RPSAP43-201ENST00000402237 625 ntBASIC23.51■■□□□ 1.35
COL23A1Q86Y22 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 AC098831.1-202ENST00000438821 336 ntBASIC23.51■■□□□ 1.35
COL23A1Q86Y22 SCARNA2-201ENST00000458748 420 ntBASIC23.51■■□□□ 1.35
COL23A1Q86Y22 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 AC010327.4-202ENST00000591484 748 ntBASIC23.51■■□□□ 1.35
COL23A1Q86Y22 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL23A1Q86Y22 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 AC006333.2-201ENST00000607957 2099 ntBASIC23.5■■□□□ 1.35
COL23A1Q86Y22 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 IGHV3-22-201ENST00000520721 359 ntBASIC23.5■■□□□ 1.35
COL23A1Q86Y22 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 AL356488.2-201ENST00000602755 427 ntBASIC23.5■■□□□ 1.35
COL23A1Q86Y22 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL23A1Q86Y22 AC104109.2-201ENST00000602919 1418 ntBASIC23.5■■□□□ 1.35
COL23A1Q86Y22 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL23A1Q86Y22 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 RPS8P6-201ENST00000426177 609 ntBASIC23.48■■□□□ 1.35
COL23A1Q86Y22 THAP5-204ENST00000438865 868 ntTSL 2 BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 AC027601.4-201ENST00000611259 610 ntBASIC23.48■■□□□ 1.35
COL23A1Q86Y22 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL23A1Q86Y22 KRT89P-201ENST00000620027 1478 ntBASIC23.48■■□□□ 1.35
COL23A1Q86Y22 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 RCN1P2-201ENST00000398357 915 ntBASIC23.47■■□□□ 1.35
COL23A1Q86Y22 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 GPX1P2-201ENST00000429271 606 ntBASIC23.47■■□□□ 1.35
COL23A1Q86Y22 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 CD63-204ENST00000546939 779 ntTSL 3 BASIC23.47■■□□□ 1.35
COL23A1Q86Y22 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms