Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS2Q86VP3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PACS2Q86VP3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PACS2Q86VP3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.85■□□□□ 0.61
PACS2Q86VP3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PACS2Q86VP3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PACS2Q86VP3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.84■□□□□ 0.61
PACS2Q86VP3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.84■□□□□ 0.61
PACS2Q86VP3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.84■□□□□ 0.61
PACS2Q86VP3 AC093787.1-201ENST00000450396 207 ntBASIC18.84■□□□□ 0.61
PACS2Q86VP3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.84■□□□□ 0.61
PACS2Q86VP3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.84■□□□□ 0.61
PACS2Q86VP3 MIR2861-201ENST00000636310 90 ntBASIC18.84■□□□□ 0.61
PACS2Q86VP3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PACS2Q86VP3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 AC010980.2-201ENST00000587099 1412 ntBASIC18.83■□□□□ 0.61
PACS2Q86VP3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.83■□□□□ 0.61
PACS2Q86VP3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.83■□□□□ 0.61
PACS2Q86VP3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PACS2Q86VP3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.83■□□□□ 0.61
PACS2Q86VP3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PACS2Q86VP3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.83■□□□□ 0.61
PACS2Q86VP3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PACS2Q86VP3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PACS2Q86VP3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 GUSBP6-202ENST00000438529 1198 ntBASIC18.83■□□□□ 0.6
PACS2Q86VP3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 AC100791.3-201ENST00000617619 330 ntBASIC18.83■□□□□ 0.6
PACS2Q86VP3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PACS2Q86VP3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PACS2Q86VP3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PACS2Q86VP3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PACS2Q86VP3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PACS2Q86VP3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PACS2Q86VP3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.83■□□□□ 0.6
PACS2Q86VP3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 MIR4758-201ENST00000577688 71 ntBASIC18.82■□□□□ 0.6
PACS2Q86VP3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.82■□□□□ 0.6
PACS2Q86VP3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PACS2Q86VP3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms