Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC12.41□□□□□ -0.42
SCXQ7RTU7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SCXQ7RTU7 CYP2D8P-201ENST00000433633 1490 ntBASIC12.4□□□□□ -0.42
SCXQ7RTU7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 AC005521.1-201ENST00000393351 872 ntBASIC12.4□□□□□ -0.42
SCXQ7RTU7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 AC113347.1-201ENST00000413321 391 ntBASIC12.4□□□□□ -0.42
SCXQ7RTU7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.4□□□□□ -0.42
SCXQ7RTU7 AC010947.1-201ENST00000623454 693 ntBASIC12.4□□□□□ -0.42
SCXQ7RTU7 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.4□□□□□ -0.42
SCXQ7RTU7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SCXQ7RTU7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.4□□□□□ -0.42
SCXQ7RTU7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
SCXQ7RTU7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
SCXQ7RTU7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 KRT18P22-201ENST00000402024 1347 ntBASIC12.39□□□□□ -0.43
SCXQ7RTU7 PKD1P5-201ENST00000532415 10291 ntBASIC12.39□□□□□ -0.43
SCXQ7RTU7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 AC018470.1-201ENST00000624790 3129 ntBASIC12.39□□□□□ -0.43
SCXQ7RTU7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 KRT18P57-201ENST00000443599 1254 ntBASIC12.39□□□□□ -0.43
SCXQ7RTU7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 B3GAT3P1-201ENST00000471720 806 ntBASIC12.39□□□□□ -0.43
SCXQ7RTU7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 DGCR10-201ENST00000609839 495 ntBASIC12.39□□□□□ -0.43
SCXQ7RTU7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
SCXQ7RTU7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SCXQ7RTU7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCXQ7RTU7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.38□□□□□ -0.43
SCXQ7RTU7 MESTP1-201ENST00000404287 994 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms