Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAPH1Q70E73 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAPH1Q70E73 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.86■□□□□ 0.61
RAPH1Q70E73 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAPH1Q70E73 TSPY23P-201ENST00000440136 739 ntBASIC18.86■□□□□ 0.61
RAPH1Q70E73 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.86■□□□□ 0.61
RAPH1Q70E73 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.86■□□□□ 0.61
RAPH1Q70E73 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.86■□□□□ 0.61
RAPH1Q70E73 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.86■□□□□ 0.61
RAPH1Q70E73 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAPH1Q70E73 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.86■□□□□ 0.61
RAPH1Q70E73 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.86■□□□□ 0.61
RAPH1Q70E73 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAPH1Q70E73 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAPH1Q70E73 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 AP000997.3-201ENST00000623333 2250 ntBASIC18.85■□□□□ 0.61
RAPH1Q70E73 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 AC069544.1-201ENST00000609399 999 ntBASIC18.85■□□□□ 0.61
RAPH1Q70E73 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAPH1Q70E73 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAPH1Q70E73 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.84■□□□□ 0.61
RAPH1Q70E73 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAPH1Q70E73 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.84■□□□□ 0.61
RAPH1Q70E73 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RAPH1Q70E73 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.84■□□□□ 0.61
RAPH1Q70E73 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
RAPH1Q70E73 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.84■□□□□ 0.61
RAPH1Q70E73 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.84■□□□□ 0.61
RAPH1Q70E73 MTDHP1-201ENST00000605323 784 ntBASIC18.84■□□□□ 0.61
RAPH1Q70E73 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.84■□□□□ 0.61
RAPH1Q70E73 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAPH1Q70E73 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RAPH1Q70E73 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.83■□□□□ 0.61
RAPH1Q70E73 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.83■□□□□ 0.61
RAPH1Q70E73 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.83■□□□□ 0.61
RAPH1Q70E73 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAPH1Q70E73 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.83■□□□□ 0.61
RAPH1Q70E73 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAPH1Q70E73 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.83■□□□□ 0.61
RAPH1Q70E73 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAPH1Q70E73 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAPH1Q70E73 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAPH1Q70E73 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAPH1Q70E73 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 AL023875.1-201ENST00000640777 796 ntBASIC18.83■□□□□ 0.6
RAPH1Q70E73 AC135050.7-201ENST00000624508 2218 ntBASIC18.83■□□□□ 0.6
RAPH1Q70E73 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.83■□□□□ 0.6
RAPH1Q70E73 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAPH1Q70E73 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms