Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ALFQ53S48 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ALFQ53S48 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALFQ53S48 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALFQ53S48 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.27■□□□□ 0.68
ALFQ53S48 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALFQ53S48 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALFQ53S48 MTMR9LP-203ENST00000426597 1545 ntBASIC19.27■□□□□ 0.68
ALFQ53S48 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ALFQ53S48 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.27■□□□□ 0.68
ALFQ53S48 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.27■□□□□ 0.68
ALFQ53S48 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.27■□□□□ 0.68
ALFQ53S48 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.27■□□□□ 0.68
ALFQ53S48 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ALFQ53S48 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
ALFQ53S48 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.27■□□□□ 0.68
ALFQ53S48 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ALFQ53S48 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALFQ53S48 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.27■□□□□ 0.68
ALFQ53S48 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ALFQ53S48 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.27■□□□□ 0.68
ALFQ53S48 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
ALFQ53S48 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ALFQ53S48 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
ALFQ53S48 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
ALFQ53S48 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
ALFQ53S48 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ALFQ53S48 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.27■□□□□ 0.67
ALFQ53S48 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ALFQ53S48 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ALFQ53S48 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
ALFQ53S48 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.26■□□□□ 0.67
ALFQ53S48 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.26■□□□□ 0.67
ALFQ53S48 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.26■□□□□ 0.67
ALFQ53S48 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALFQ53S48 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.26■□□□□ 0.67
ALFQ53S48 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.26■□□□□ 0.67
ALFQ53S48 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ALFQ53S48 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.26■□□□□ 0.67
ALFQ53S48 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.26■□□□□ 0.67
ALFQ53S48 AL512604.3-201ENST00000569583 964 ntBASIC19.26■□□□□ 0.67
ALFQ53S48 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.26■□□□□ 0.67
ALFQ53S48 AC098818.2-201ENST00000564925 2320 ntBASIC19.26■□□□□ 0.67
ALFQ53S48 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.26■□□□□ 0.67
ALFQ53S48 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.26■□□□□ 0.67
ALFQ53S48 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ALFQ53S48 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.25■□□□□ 0.67
ALFQ53S48 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.25■□□□□ 0.67
ALFQ53S48 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.25■□□□□ 0.67
ALFQ53S48 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ALFQ53S48 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.25■□□□□ 0.67
ALFQ53S48 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.25■□□□□ 0.67
ALFQ53S48 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.25■□□□□ 0.67
ALFQ53S48 AC117947.1-201ENST00000427448 529 ntBASIC19.25■□□□□ 0.67
ALFQ53S48 BX664615.1-201ENST00000443558 458 ntBASIC19.25■□□□□ 0.67
ALFQ53S48 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.25■□□□□ 0.67
ALFQ53S48 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.25■□□□□ 0.67
ALFQ53S48 AC139887.4-201ENST00000607877 719 ntBASIC19.25■□□□□ 0.67
ALFQ53S48 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.25■□□□□ 0.67
ALFQ53S48 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ALFQ53S48 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALFQ53S48 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 AC087289.5-201ENST00000586076 3175 ntBASIC19.24■□□□□ 0.67
ALFQ53S48 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 AL357033.4-201ENST00000617703 1807 ntBASIC19.24■□□□□ 0.67
ALFQ53S48 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.24■□□□□ 0.67
ALFQ53S48 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.24■□□□□ 0.67
ALFQ53S48 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ALFQ53S48 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.24■□□□□ 0.67
ALFQ53S48 AL023973.1-201ENST00000624619 620 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms