Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LONRF3Q496Y0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.33■■□□□ 1
LONRF3Q496Y0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
LONRF3Q496Y0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.33■■□□□ 1
LONRF3Q496Y0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
LONRF3Q496Y0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LONRF3Q496Y0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.32■■□□□ 1
LONRF3Q496Y0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LONRF3Q496Y0 AC135050.7-201ENST00000624508 2218 ntBASIC21.32■■□□□ 1
LONRF3Q496Y0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LONRF3Q496Y0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.32■■□□□ 1
LONRF3Q496Y0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.32■■□□□ 1
LONRF3Q496Y0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.32■■□□□ 1
LONRF3Q496Y0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.32■■□□□ 1
LONRF3Q496Y0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.32■■□□□ 1
LONRF3Q496Y0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.32■■□□□ 1
LONRF3Q496Y0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.32■■□□□ 1
LONRF3Q496Y0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 AL445675.2-201ENST00000620291 557 ntBASIC21.32■■□□□ 1
LONRF3Q496Y0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LONRF3Q496Y0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.32■■□□□ 1
LONRF3Q496Y0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.32■■□□□ 1
LONRF3Q496Y0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LONRF3Q496Y0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LONRF3Q496Y0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.31■■□□□ 1
LONRF3Q496Y0 KRT8P11-201ENST00000409686 1436 ntBASIC21.31■■□□□ 1
LONRF3Q496Y0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.31■■□□□ 1
LONRF3Q496Y0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
LONRF3Q496Y0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.31■■□□□ 1
LONRF3Q496Y0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.31■■□□□ 1
LONRF3Q496Y0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.31■■□□□ 1
LONRF3Q496Y0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
LONRF3Q496Y0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LONRF3Q496Y0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.31■■□□□ 1
LONRF3Q496Y0 AC004980.1-204ENST00000429707 299 ntBASIC21.31■■□□□ 1
LONRF3Q496Y0 AC116562.2-201ENST00000507042 360 ntBASIC21.31■■□□□ 1
LONRF3Q496Y0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.31■■□□□ 1
LONRF3Q496Y0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.31■■□□□ 1
LONRF3Q496Y0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.31■■□□□ 1
LONRF3Q496Y0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.31■■□□□ 1
LONRF3Q496Y0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.31■■□□□ 1
LONRF3Q496Y0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.31■■□□□ 1
LONRF3Q496Y0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.31■■□□□ 1
LONRF3Q496Y0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.31■■□□□ 1
LONRF3Q496Y0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.31■■□□□ 1
LONRF3Q496Y0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.3■■□□□ 1
LONRF3Q496Y0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.3■■□□□ 1
LONRF3Q496Y0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LONRF3Q496Y0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
LONRF3Q496Y0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.3■■□□□ 1
LONRF3Q496Y0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.3■■□□□ 1
LONRF3Q496Y0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.3■■□□□ 1
LONRF3Q496Y0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.3■■□□□ 1
LONRF3Q496Y0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.3■■□□□ 1
LONRF3Q496Y0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.3■■□□□ 1
LONRF3Q496Y0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.3■■□□□ 1
LONRF3Q496Y0 AL031985.4-201ENST00000642138 673 ntBASIC21.3■■□□□ 1
LONRF3Q496Y0 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LONRF3Q496Y0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LONRF3Q496Y0 RCC2P6-201ENST00000526625 1557 ntBASIC21.3■■□□□ 1
LONRF3Q496Y0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.3■■□□□ 1
LONRF3Q496Y0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.3■■□□□ 1
LONRF3Q496Y0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
LONRF3Q496Y0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.3■■□□□ 1
LONRF3Q496Y0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.29■■□□□ 1
LONRF3Q496Y0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms