Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 AC079781.3-201ENST00000449110 356 ntBASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTC1Q2NKJ3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTC1Q2NKJ3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 DRAXINP1-201ENST00000437611 948 ntBASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 AC091304.2-201ENST00000564639 760 ntBASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 SLC25A6P4-201ENST00000586535 553 ntBASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 AL121772.3-201ENST00000610840 674 ntBASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.02■□□□□ 0.8
CTC1Q2NKJ3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CTC1Q2NKJ3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 HLA-F-220ENST00000434407 884 ntBASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CTC1Q2NKJ3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 AP002469.2-201ENST00000531724 424 ntBASIC20■□□□□ 0.79
CTC1Q2NKJ3 TPSP2-201ENST00000561760 610 ntBASIC20■□□□□ 0.79
CTC1Q2NKJ3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CTC1Q2NKJ3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CTC1Q2NKJ3 AC024243.1-201ENST00000609234 778 ntBASIC20■□□□□ 0.79
CTC1Q2NKJ3 AC079602.3-201ENST00000623931 403 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms