Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
GABREP78334 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.82■□□□□ 0.44
GABREP78334 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 AC138894.3-201ENST00000603787 634 ntBASIC17.82■□□□□ 0.44
GABREP78334 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 AC099778.1-201ENST00000568593 1911 ntBASIC17.82■□□□□ 0.44
GABREP78334 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
GABREP78334 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABREP78334 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.82■□□□□ 0.44
GABREP78334 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.82■□□□□ 0.44
GABREP78334 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
GABREP78334 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
GABREP78334 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.81■□□□□ 0.44
GABREP78334 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 Z83836.1-201ENST00000624605 1642 ntBASIC17.81■□□□□ 0.44
GABREP78334 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.81■□□□□ 0.44
GABREP78334 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.81■□□□□ 0.44
GABREP78334 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
GABREP78334 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 AP002469.2-201ENST00000531724 424 ntBASIC17.81■□□□□ 0.44
GABREP78334 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.81■□□□□ 0.44
GABREP78334 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.81■□□□□ 0.44
GABREP78334 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.81■□□□□ 0.44
GABREP78334 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.81■□□□□ 0.44
GABREP78334 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABREP78334 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.8■□□□□ 0.44
GABREP78334 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.8■□□□□ 0.44
GABREP78334 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
GABREP78334 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
GABREP78334 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.8■□□□□ 0.44
GABREP78334 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.8■□□□□ 0.44
GABREP78334 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.8■□□□□ 0.44
GABREP78334 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.8■□□□□ 0.44
GABREP78334 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GABREP78334 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.8■□□□□ 0.44
GABREP78334 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.8■□□□□ 0.44
GABREP78334 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.8■□□□□ 0.44
GABREP78334 AL662844.1-201ENST00000546340 181 ntBASIC17.8■□□□□ 0.44
GABREP78334 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.8■□□□□ 0.44
GABREP78334 AC074051.2-201ENST00000565115 352 ntBASIC17.8■□□□□ 0.44
GABREP78334 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.8■□□□□ 0.44
GABREP78334 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.8■□□□□ 0.44
GABREP78334 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
GABREP78334 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.8■□□□□ 0.44
GABREP78334 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABREP78334 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GABREP78334 PCDHAC2-203ENST00000615316 3011 ntBASIC17.8■□□□□ 0.44
GABREP78334 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GABREP78334 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.79■□□□□ 0.44
GABREP78334 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.79■□□□□ 0.44
GABREP78334 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.79■□□□□ 0.44
GABREP78334 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.79■□□□□ 0.44
GABREP78334 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.79■□□□□ 0.44
GABREP78334 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 SLC25A6P4-201ENST00000586535 553 ntBASIC17.79■□□□□ 0.44
GABREP78334 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.79■□□□□ 0.44
GABREP78334 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABREP78334 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms