Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDX1P52945 ZNF815P-204ENST00000434898 1737 ntBASIC18.2■□□□□ 0.5
PDX1P52945 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PDX1P52945 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDX1P52945 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.19■□□□□ 0.5
PDX1P52945 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.19■□□□□ 0.5
PDX1P52945 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDX1P52945 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.19■□□□□ 0.5
PDX1P52945 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PDX1P52945 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PDX1P52945 AC026396.1-201ENST00000419388 421 ntBASIC18.19■□□□□ 0.5
PDX1P52945 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.19■□□□□ 0.5
PDX1P52945 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.19■□□□□ 0.5
PDX1P52945 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.19■□□□□ 0.5
PDX1P52945 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDX1P52945 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PDX1P52945 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDX1P52945 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDX1P52945 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PDX1P52945 SDHAP1-207ENST00000440850 2000 ntBASIC18.18■□□□□ 0.5
PDX1P52945 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.18■□□□□ 0.5
PDX1P52945 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
PDX1P52945 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDX1P52945 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.18■□□□□ 0.5
PDX1P52945 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PDX1P52945 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDX1P52945 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.18■□□□□ 0.5
PDX1P52945 GPAT2P1-201ENST00000444924 1672 ntBASIC18.18■□□□□ 0.5
PDX1P52945 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDX1P52945 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PDX1P52945 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.17■□□□□ 0.5
PDX1P52945 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.17■□□□□ 0.5
PDX1P52945 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PDX1P52945 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.17■□□□□ 0.5
PDX1P52945 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.17■□□□□ 0.5
PDX1P52945 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.17■□□□□ 0.5
PDX1P52945 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.17■□□□□ 0.5
PDX1P52945 RASA4DP-201ENST00000460726 1199 ntBASIC18.17■□□□□ 0.5
PDX1P52945 AC092597.1-201ENST00000487352 616 ntBASIC18.17■□□□□ 0.5
PDX1P52945 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.17■□□□□ 0.5
PDX1P52945 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.17■□□□□ 0.5
PDX1P52945 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.17■□□□□ 0.5
PDX1P52945 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.17■□□□□ 0.5
PDX1P52945 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.17■□□□□ 0.5
PDX1P52945 Z82202.1-201ENST00000623446 1880 ntBASIC18.17■□□□□ 0.5
PDX1P52945 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.17■□□□□ 0.5
PDX1P52945 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PDX1P52945 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.17■□□□□ 0.5
PDX1P52945 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDX1P52945 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDX1P52945 HCG11-201ENST00000411553 5696 ntBASIC18.16■□□□□ 0.5
PDX1P52945 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDX1P52945 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDX1P52945 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PDX1P52945 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDX1P52945 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PDX1P52945 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms