Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEK3P51956 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NEK3P51956 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NEK3P51956 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEK3P51956 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.33■□□□□ 0.69
NEK3P51956 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
NEK3P51956 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.33■□□□□ 0.69
NEK3P51956 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NEK3P51956 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEK3P51956 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.33■□□□□ 0.68
NEK3P51956 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.33■□□□□ 0.68
NEK3P51956 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NEK3P51956 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.33■□□□□ 0.68
NEK3P51956 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.33■□□□□ 0.68
NEK3P51956 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NEK3P51956 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NEK3P51956 ZNF815P-204ENST00000434898 1737 ntBASIC19.33■□□□□ 0.68
NEK3P51956 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NEK3P51956 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 AC120498.9-201ENST00000339021 3867 ntBASIC19.32■□□□□ 0.68
NEK3P51956 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.32■□□□□ 0.68
NEK3P51956 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NEK3P51956 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.32■□□□□ 0.68
NEK3P51956 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.32■□□□□ 0.68
NEK3P51956 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NEK3P51956 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.32■□□□□ 0.68
NEK3P51956 AC113347.1-201ENST00000413321 391 ntBASIC19.32■□□□□ 0.68
NEK3P51956 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NEK3P51956 AC128688.1-201ENST00000487626 519 ntBASIC19.32■□□□□ 0.68
NEK3P51956 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.32■□□□□ 0.68
NEK3P51956 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NEK3P51956 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.32■□□□□ 0.68
NEK3P51956 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NEK3P51956 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NEK3P51956 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 AC135050.7-201ENST00000624508 2218 ntBASIC19.32■□□□□ 0.68
NEK3P51956 AIRN-201ENST00000601203 4374 ntBASIC19.32■□□□□ 0.68
NEK3P51956 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.32■□□□□ 0.68
NEK3P51956 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEK3P51956 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.31■□□□□ 0.68
NEK3P51956 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.31■□□□□ 0.68
NEK3P51956 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.31■□□□□ 0.68
NEK3P51956 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NEK3P51956 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.31■□□□□ 0.68
NEK3P51956 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 SLC25A3P1-201ENST00000443844 931 ntBASIC19.31■□□□□ 0.68
NEK3P51956 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.31■□□□□ 0.68
NEK3P51956 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.31■□□□□ 0.68
NEK3P51956 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NEK3P51956 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.31■□□□□ 0.68
NEK3P51956 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 WIZP1-201ENST00000531444 2299 ntBASIC19.31■□□□□ 0.68
NEK3P51956 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.31■□□□□ 0.68
NEK3P51956 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEK3P51956 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK3P51956 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.31■□□□□ 0.68
NEK3P51956 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK3P51956 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK3P51956 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 FP475955.4-201ENST00000623131 1990 ntBASIC19.3■□□□□ 0.68
NEK3P51956 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK3P51956 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK3P51956 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.3■□□□□ 0.68
NEK3P51956 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK3P51956 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NEK3P51956 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK3P51956 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.3■□□□□ 0.68
NEK3P51956 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.3■□□□□ 0.68
NEK3P51956 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms