Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CLCN2P51788 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN2P51788 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLCN2P51788 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN2P51788 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCN2P51788 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLCN2P51788 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
CLCN2P51788 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLCN2P51788 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCN2P51788 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCN2P51788 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.15■□□□□ 0.5
CLCN2P51788 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLCN2P51788 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.15■□□□□ 0.5
CLCN2P51788 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCN2P51788 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCN2P51788 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.14■□□□□ 0.5
CLCN2P51788 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCN2P51788 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.14■□□□□ 0.5
CLCN2P51788 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN2P51788 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN2P51788 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CLCN2P51788 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLCN2P51788 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN2P51788 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 FAM197Y1-201ENST00000421178 764 ntBASIC18.14■□□□□ 0.49
CLCN2P51788 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN2P51788 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.14■□□□□ 0.49
CLCN2P51788 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.14■□□□□ 0.49
CLCN2P51788 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.14■□□□□ 0.49
CLCN2P51788 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCN2P51788 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
CLCN2P51788 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCN2P51788 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CLCN2P51788 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN2P51788 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CLCN2P51788 AL355355.2-201ENST00000442321 338 ntBASIC18.13■□□□□ 0.49
CLCN2P51788 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCN2P51788 CR392000.1-201ENST00000624770 1228 ntBASIC18.13■□□□□ 0.49
CLCN2P51788 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CLCN2P51788 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CLCN2P51788 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CLCN2P51788 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 KRT16P1-201ENST00000399124 1418 ntBASIC18.13■□□□□ 0.49
CLCN2P51788 KRT8P8-201ENST00000434750 1448 ntBASIC18.13■□□□□ 0.49
CLCN2P51788 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCN2P51788 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CLCN2P51788 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCN2P51788 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
CLCN2P51788 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CLCN2P51788 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.12■□□□□ 0.49
CLCN2P51788 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.12■□□□□ 0.49
CLCN2P51788 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLCN2P51788 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.12■□□□□ 0.49
CLCN2P51788 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms