Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 FAM197Y4-202ENST00000622692 608 ntBASIC16.5■□□□□ 0.23
CX3CR1P49238 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CR1P49238 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CX3CR1P49238 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CR1P49238 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CR1P49238 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CR1P49238 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CR1P49238 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CX3CR1P49238 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.5■□□□□ 0.23
CX3CR1P49238 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.49■□□□□ 0.23
CX3CR1P49238 AC009113.1-201ENST00000570267 2443 ntBASIC16.49■□□□□ 0.23
CX3CR1P49238 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 AC007613.1-201ENST00000572811 2597 ntBASIC16.49■□□□□ 0.23
CX3CR1P49238 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.49■□□□□ 0.23
CX3CR1P49238 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 RCC2P6-201ENST00000526625 1557 ntBASIC16.49■□□□□ 0.23
CX3CR1P49238 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CX3CR1P49238 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.49■□□□□ 0.23
CX3CR1P49238 CR392000.1-201ENST00000624770 1228 ntBASIC16.49■□□□□ 0.23
CX3CR1P49238 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CX3CR1P49238 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CX3CR1P49238 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.49■□□□□ 0.23
CX3CR1P49238 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CX3CR1P49238 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 AC090164.3-201ENST00000610780 2143 ntBASIC16.48■□□□□ 0.23
CX3CR1P49238 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CX3CR1P49238 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.48■□□□□ 0.23
CX3CR1P49238 AC004951.3-201ENST00000418645 1148 ntBASIC16.48■□□□□ 0.23
CX3CR1P49238 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.48■□□□□ 0.23
CX3CR1P49238 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.48■□□□□ 0.23
CX3CR1P49238 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.48■□□□□ 0.23
CX3CR1P49238 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.48■□□□□ 0.23
CX3CR1P49238 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CX3CR1P49238 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CX3CR1P49238 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.47■□□□□ 0.23
CX3CR1P49238 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.47■□□□□ 0.23
CX3CR1P49238 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CX3CR1P49238 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.47■□□□□ 0.23
CX3CR1P49238 AC091390.4-202ENST00000476426 537 ntBASIC16.47■□□□□ 0.23
CX3CR1P49238 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.47■□□□□ 0.23
CX3CR1P49238 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CX3CR1P49238 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CX3CR1P49238 RARRES2P10-201ENST00000564312 460 ntBASIC16.47■□□□□ 0.23
CX3CR1P49238 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CX3CR1P49238 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.47■□□□□ 0.23
CX3CR1P49238 AF186192.3-201ENST00000583427 947 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms