Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 AL138781.2-201ENST00000617896 1843 ntBASIC18.65■□□□□ 0.58
HMGCLP35914 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HMGCLP35914 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCLP35914 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCLP35914 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCLP35914 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HMGCLP35914 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.65■□□□□ 0.58
HMGCLP35914 KRT18P41-201ENST00000518924 1277 ntBASIC18.65■□□□□ 0.58
HMGCLP35914 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCLP35914 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HMGCLP35914 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.65■□□□□ 0.58
HMGCLP35914 AC005363.2-201ENST00000618631 242 ntBASIC18.65■□□□□ 0.58
HMGCLP35914 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
HMGCLP35914 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCLP35914 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.65■□□□□ 0.58
HMGCLP35914 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
HMGCLP35914 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGCLP35914 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGCLP35914 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
HMGCLP35914 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HMGCLP35914 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.64■□□□□ 0.58
HMGCLP35914 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLP35914 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLP35914 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLP35914 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCLP35914 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLP35914 AC113347.1-201ENST00000413321 391 ntBASIC18.64■□□□□ 0.57
HMGCLP35914 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.64■□□□□ 0.57
HMGCLP35914 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGCLP35914 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HMGCLP35914 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
HMGCLP35914 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLP35914 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HMGCLP35914 KRT8P7-201ENST00000533003 1432 ntBASIC18.64■□□□□ 0.57
HMGCLP35914 HOXB1-202ENST00000577092 1414 ntBASIC18.64■□□□□ 0.57
HMGCLP35914 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.64■□□□□ 0.57
HMGCLP35914 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HMGCLP35914 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLP35914 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HMGCLP35914 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HMGCLP35914 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCLP35914 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HMGCLP35914 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
HMGCLP35914 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCLP35914 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCLP35914 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCLP35914 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HMGCLP35914 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCLP35914 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCLP35914 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGCLP35914 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCLP35914 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.63■□□□□ 0.57
HMGCLP35914 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HMGCLP35914 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLP35914 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLP35914 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 ECEL1P3-201ENST00000427961 737 ntBASIC18.62■□□□□ 0.57
HMGCLP35914 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.62■□□□□ 0.57
HMGCLP35914 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLP35914 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLP35914 NEK4P2-201ENST00000580004 1012 ntBASIC18.62■□□□□ 0.57
HMGCLP35914 AL138966.2-201ENST00000621997 464 ntBASIC18.62■□□□□ 0.57
HMGCLP35914 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCLP35914 MYC-208ENST00000641036 567 ntBASIC18.62■□□□□ 0.57
HMGCLP35914 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLP35914 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLP35914 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms