Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT20P35900 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.84■□□□□ 0.45
KRT20P35900 AL160286.2-201ENST00000567150 934 ntBASIC17.84■□□□□ 0.45
KRT20P35900 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT20P35900 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KRT20P35900 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.84■□□□□ 0.45
KRT20P35900 HLA-A-209ENST00000638375 975 ntBASIC17.84■□□□□ 0.45
KRT20P35900 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KRT20P35900 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT20P35900 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT20P35900 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT20P35900 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT20P35900 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT20P35900 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT20P35900 KRT16P1-201ENST00000399124 1418 ntBASIC17.83■□□□□ 0.45
KRT20P35900 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT20P35900 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT20P35900 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.83■□□□□ 0.45
KRT20P35900 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT20P35900 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT20P35900 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
KRT20P35900 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KRT20P35900 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KRT20P35900 AC012618.2-201ENST00000428058 849 ntBASIC17.83■□□□□ 0.44
KRT20P35900 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.83■□□□□ 0.44
KRT20P35900 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.83■□□□□ 0.44
KRT20P35900 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 AL445675.2-201ENST00000620291 557 ntBASIC17.83■□□□□ 0.44
KRT20P35900 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT20P35900 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT20P35900 CR392000.1-201ENST00000624770 1228 ntBASIC17.83■□□□□ 0.44
KRT20P35900 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT20P35900 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT20P35900 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT20P35900 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
KRT20P35900 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KRT20P35900 RPS2P55-201ENST00000397318 883 ntBASIC17.82■□□□□ 0.44
KRT20P35900 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT20P35900 AC107956.1-201ENST00000494359 873 ntBASIC17.82■□□□□ 0.44
KRT20P35900 AC008550.1-201ENST00000511500 884 ntBASIC17.82■□□□□ 0.44
KRT20P35900 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
KRT20P35900 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
KRT20P35900 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
KRT20P35900 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT20P35900 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT20P35900 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT20P35900 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT20P35900 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT20P35900 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KRT20P35900 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
KRT20P35900 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KRT20P35900 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT20P35900 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.81■□□□□ 0.44
KRT20P35900 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.81■□□□□ 0.44
KRT20P35900 RPS2P4-201ENST00000476944 856 ntBASIC17.81■□□□□ 0.44
KRT20P35900 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 AL031985.4-201ENST00000642138 673 ntBASIC17.81■□□□□ 0.44
KRT20P35900 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
KRT20P35900 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT20P35900 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.81■□□□□ 0.44
KRT20P35900 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT20P35900 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT20P35900 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms