Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.8■□□□□ 0.44
RORAP35398 AC036111.1-201ENST00000533973 1582 ntBASIC17.8■□□□□ 0.44
RORAP35398 AC141586.3-201ENST00000562166 1838 ntBASIC17.8■□□□□ 0.44
RORAP35398 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RORAP35398 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.8■□□□□ 0.44
RORAP35398 MCCD1P1-208ENST00000445732 328 ntBASIC17.8■□□□□ 0.44
RORAP35398 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.8■□□□□ 0.44
RORAP35398 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.8■□□□□ 0.44
RORAP35398 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.8■□□□□ 0.44
RORAP35398 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RORAP35398 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.8■□□□□ 0.44
RORAP35398 MIR3180-5-201ENST00000583743 153 ntBASIC17.8■□□□□ 0.44
RORAP35398 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.8■□□□□ 0.44
RORAP35398 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.8■□□□□ 0.44
RORAP35398 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
RORAP35398 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 AC005332.7-201ENST00000614046 2005 ntBASIC17.8■□□□□ 0.44
RORAP35398 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RORAP35398 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.8■□□□□ 0.44
RORAP35398 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RORAP35398 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.79■□□□□ 0.44
RORAP35398 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RORAP35398 FEM1AP3-201ENST00000403722 1741 ntBASIC17.79■□□□□ 0.44
RORAP35398 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RORAP35398 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.79■□□□□ 0.44
RORAP35398 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.79■□□□□ 0.44
RORAP35398 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RORAP35398 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.79■□□□□ 0.44
RORAP35398 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RORAP35398 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
RORAP35398 AC083849.1-201ENST00000615227 514 ntBASIC17.79■□□□□ 0.44
RORAP35398 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.79■□□□□ 0.44
RORAP35398 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RORAP35398 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.79■□□□□ 0.44
RORAP35398 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RORAP35398 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
RORAP35398 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.79■□□□□ 0.44
RORAP35398 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.78■□□□□ 0.44
RORAP35398 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 AC005332.1-201ENST00000577698 1310 ntBASIC17.78■□□□□ 0.44
RORAP35398 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.78■□□□□ 0.44
RORAP35398 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.78■□□□□ 0.44
RORAP35398 AL136038.3-201ENST00000561909 1096 ntBASIC17.78■□□□□ 0.44
RORAP35398 AC116407.4-201ENST00000623319 1061 ntBASIC17.78■□□□□ 0.44
RORAP35398 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.78■□□□□ 0.44
RORAP35398 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RORAP35398 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.78■□□□□ 0.44
RORAP35398 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
RORAP35398 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RORAP35398 IER3-202ENST00000376377 1350 ntBASIC17.78■□□□□ 0.44
RORAP35398 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RORAP35398 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RORAP35398 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RORAP35398 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RORAP35398 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.77■□□□□ 0.44
RORAP35398 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RORAP35398 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.77■□□□□ 0.44
RORAP35398 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RORAP35398 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RORAP35398 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RORAP35398 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
RORAP35398 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RORAP35398 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RORAP35398 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms