Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.01■□□□□ 0.31
GDF1P27539 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.01■□□□□ 0.31
GDF1P27539 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.01■□□□□ 0.31
GDF1P27539 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.01■□□□□ 0.31
GDF1P27539 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.01■□□□□ 0.31
GDF1P27539 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.01■□□□□ 0.31
GDF1P27539 GCSHP2-201ENST00000560971 527 ntBASIC17.01■□□□□ 0.31
GDF1P27539 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.01■□□□□ 0.31
GDF1P27539 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
GDF1P27539 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 AC008556.1-201ENST00000610908 2040 ntBASIC17.01■□□□□ 0.31
GDF1P27539 AC005332.7-201ENST00000614046 2005 ntBASIC17.01■□□□□ 0.31
GDF1P27539 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GDF1P27539 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.01■□□□□ 0.31
GDF1P27539 AL109659.2-201ENST00000606809 1674 ntBASIC17.01■□□□□ 0.31
GDF1P27539 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
GDF1P27539 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 SAPCD2P2-201ENST00000431719 1174 ntBASIC17■□□□□ 0.31
GDF1P27539 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17■□□□□ 0.31
GDF1P27539 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17■□□□□ 0.31
GDF1P27539 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GDF1P27539 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17■□□□□ 0.31
GDF1P27539 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GDF1P27539 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
GDF1P27539 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GDF1P27539 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GDF1P27539 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.99■□□□□ 0.31
GDF1P27539 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDF1P27539 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDF1P27539 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDF1P27539 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDF1P27539 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.99■□□□□ 0.31
GDF1P27539 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDF1P27539 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.99■□□□□ 0.31
GDF1P27539 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.99■□□□□ 0.31
GDF1P27539 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.99■□□□□ 0.31
GDF1P27539 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
GDF1P27539 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
GDF1P27539 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.99■□□□□ 0.31
GDF1P27539 AC024243.1-201ENST00000609234 778 ntBASIC16.99■□□□□ 0.31
GDF1P27539 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.99■□□□□ 0.31
GDF1P27539 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GDF1P27539 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
GDF1P27539 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.99■□□□□ 0.31
GDF1P27539 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GDF1P27539 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.99■□□□□ 0.31
GDF1P27539 KRT8P32-201ENST00000512863 1461 ntBASIC16.99■□□□□ 0.31
GDF1P27539 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
GDF1P27539 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 AL161938.1-201ENST00000569833 2180 ntBASIC16.98■□□□□ 0.31
GDF1P27539 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.98■□□□□ 0.31
GDF1P27539 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.98■□□□□ 0.31
GDF1P27539 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.98■□□□□ 0.31
GDF1P27539 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.98■□□□□ 0.31
GDF1P27539 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
GDF1P27539 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.98■□□□□ 0.31
GDF1P27539 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.98■□□□□ 0.31
GDF1P27539 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GDF1P27539 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
GDF1P27539 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.98■□□□□ 0.31
GDF1P27539 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.98■□□□□ 0.31
GDF1P27539 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GDF1P27539 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms