Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
XPAP23025 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
XPAP23025 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
XPAP23025 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
XPAP23025 AC116562.4-201ENST00000641316 2276 ntBASIC18.93■□□□□ 0.62
XPAP23025 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.92■□□□□ 0.62
XPAP23025 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.92■□□□□ 0.62
XPAP23025 AL023284.2-201ENST00000405850 579 ntBASIC18.92■□□□□ 0.62
XPAP23025 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
XPAP23025 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.92■□□□□ 0.62
XPAP23025 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.92■□□□□ 0.62
XPAP23025 MIR4674-201ENST00000582457 87 ntBASIC18.92■□□□□ 0.62
XPAP23025 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 AL031432.5-201ENST00000641059 760 ntBASIC18.92■□□□□ 0.62
XPAP23025 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
XPAP23025 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
XPAP23025 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
XPAP23025 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.92■□□□□ 0.62
XPAP23025 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
XPAP23025 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
XPAP23025 AC005332.7-201ENST00000614046 2005 ntBASIC18.91■□□□□ 0.62
XPAP23025 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.91■□□□□ 0.62
XPAP23025 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.91■□□□□ 0.62
XPAP23025 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.91■□□□□ 0.62
XPAP23025 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
XPAP23025 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
XPAP23025 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.91■□□□□ 0.62
XPAP23025 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.91■□□□□ 0.62
XPAP23025 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.91■□□□□ 0.62
XPAP23025 AC009947.2-201ENST00000444014 672 ntBASIC18.91■□□□□ 0.62
XPAP23025 AC104076.2-201ENST00000448912 469 ntBASIC18.91■□□□□ 0.62
XPAP23025 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 AC139887.4-201ENST00000607877 719 ntBASIC18.91■□□□□ 0.62
XPAP23025 AL590326.2-201ENST00000625139 305 ntBASIC18.91■□□□□ 0.62
XPAP23025 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
XPAP23025 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
XPAP23025 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
XPAP23025 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.9■□□□□ 0.62
XPAP23025 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.9■□□□□ 0.62
XPAP23025 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 DUX4L26-201ENST00000489078 1255 ntBASIC18.9■□□□□ 0.62
XPAP23025 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
XPAP23025 LINC01238-205ENST00000567549 1107 ntBASIC18.9■□□□□ 0.62
XPAP23025 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.9■□□□□ 0.62
XPAP23025 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
XPAP23025 CR769767.2-201ENST00000622735 460 ntBASIC18.9■□□□□ 0.62
XPAP23025 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.9■□□□□ 0.62
XPAP23025 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.9■□□□□ 0.62
XPAP23025 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 AL512353.2-201ENST00000448759 1962 ntBASIC18.9■□□□□ 0.62
XPAP23025 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.9■□□□□ 0.62
XPAP23025 RCC2P3-201ENST00000418112 1537 ntBASIC18.9■□□□□ 0.62
XPAP23025 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
XPAP23025 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
XPAP23025 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
XPAP23025 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.89■□□□□ 0.62
XPAP23025 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.89■□□□□ 0.62
XPAP23025 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
XPAP23025 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
XPAP23025 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
XPAP23025 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
XPAP23025 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms