Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
MMP8P22894 MIR564-202ENST00000385049 94 ntBASIC19.73■□□□□ 0.75
MMP8P22894 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP8P22894 AL353719.1-201ENST00000566847 864 ntBASIC19.73■□□□□ 0.75
MMP8P22894 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
MMP8P22894 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MMP8P22894 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MMP8P22894 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP8P22894 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.72■□□□□ 0.75
MMP8P22894 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP8P22894 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.72■□□□□ 0.75
MMP8P22894 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP8P22894 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
MMP8P22894 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP8P22894 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.72■□□□□ 0.75
MMP8P22894 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP8P22894 KRT18P41-201ENST00000518924 1277 ntBASIC19.72■□□□□ 0.75
MMP8P22894 AC112777.1-201ENST00000540175 1423 ntBASIC19.72■□□□□ 0.75
MMP8P22894 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MMP8P22894 AC092338.2-201ENST00000568827 1415 ntBASIC19.72■□□□□ 0.75
MMP8P22894 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP8P22894 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
MMP8P22894 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MMP8P22894 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
MMP8P22894 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
MMP8P22894 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP8P22894 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MMP8P22894 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MMP8P22894 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
MMP8P22894 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.71■□□□□ 0.75
MMP8P22894 TSPY17P-201ENST00000450329 467 ntBASIC19.71■□□□□ 0.75
MMP8P22894 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.71■□□□□ 0.75
MMP8P22894 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP8P22894 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP8P22894 MYC-208ENST00000641036 567 ntBASIC19.71■□□□□ 0.75
MMP8P22894 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP8P22894 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
MMP8P22894 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP8P22894 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MMP8P22894 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MMP8P22894 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP8P22894 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
MMP8P22894 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
MMP8P22894 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP8P22894 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP8P22894 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.7■□□□□ 0.74
MMP8P22894 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.7■□□□□ 0.74
MMP8P22894 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.7■□□□□ 0.74
MMP8P22894 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.7■□□□□ 0.74
MMP8P22894 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MMP8P22894 AC093827.2-201ENST00000512654 315 ntBASIC19.7■□□□□ 0.74
MMP8P22894 AP003041.3-201ENST00000527151 707 ntBASIC19.7■□□□□ 0.74
MMP8P22894 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.7■□□□□ 0.74
MMP8P22894 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.7■□□□□ 0.74
MMP8P22894 AC066615.1-201ENST00000640911 628 ntBASIC19.7■□□□□ 0.74
MMP8P22894 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP8P22894 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP8P22894 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP8P22894 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP8P22894 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms