Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDH1P12830 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH1P12830 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH1P12830 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH1P12830 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH1P12830 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CDH1P12830 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 UNC93B2-201ENST00000285383 730 ntBASIC18.29■□□□□ 0.52
CDH1P12830 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDH1P12830 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.29■□□□□ 0.52
CDH1P12830 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.29■□□□□ 0.52
CDH1P12830 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CDH1P12830 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH1P12830 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH1P12830 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH1P12830 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDH1P12830 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDH1P12830 AC096733.2-201ENST00000609937 1394 ntBASIC18.29■□□□□ 0.52
CDH1P12830 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH1P12830 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDH1P12830 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDH1P12830 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH1P12830 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CDH1P12830 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH1P12830 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH1P12830 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH1P12830 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH1P12830 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH1P12830 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 CRYGFP-201ENST00000418459 633 ntBASIC18.28■□□□□ 0.52
CDH1P12830 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH1P12830 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH1P12830 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 AP000525.1-201ENST00000608286 694 ntBASIC18.28■□□□□ 0.52
CDH1P12830 AC135050.7-201ENST00000624508 2218 ntBASIC18.28■□□□□ 0.52
CDH1P12830 AL390961.4-201ENST00000623958 2535 ntBASIC18.28■□□□□ 0.52
CDH1P12830 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH1P12830 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH1P12830 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH1P12830 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CDH1P12830 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH1P12830 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH1P12830 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.27■□□□□ 0.52
CDH1P12830 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH1P12830 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 TSPY15P-201ENST00000457163 923 ntBASIC18.27■□□□□ 0.52
CDH1P12830 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.27■□□□□ 0.52
CDH1P12830 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.27■□□□□ 0.52
CDH1P12830 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CDH1P12830 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH1P12830 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH1P12830 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDH1P12830 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDH1P12830 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDH1P12830 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.27■□□□□ 0.51
CDH1P12830 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CDH1P12830 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.27■□□□□ 0.51
CDH1P12830 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CDH1P12830 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH1P12830 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.27■□□□□ 0.51
CDH1P12830 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CDH1P12830 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH1P12830 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH1P12830 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CDH1P12830 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH1P12830 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH1P12830 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
CDH1P12830 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH1P12830 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH1P12830 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH1P12830 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms