Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 AP000523.1-201ENST00000398242 1049 ntBASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 HOMER2P1-201ENST00000455653 964 ntBASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 AC020763.4-201ENST00000623414 4170 ntBASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCNYL3P0C7X3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.08■□□□□ 0.49
CCNYL3P0C7X3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCNYL3P0C7X3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.08■□□□□ 0.49
CCNYL3P0C7X3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCNYL3P0C7X3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCNYL3P0C7X3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.08■□□□□ 0.49
CCNYL3P0C7X3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCNYL3P0C7X3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCNYL3P0C7X3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.08■□□□□ 0.49
CCNYL3P0C7X3 AP000974.1-201ENST00000623909 2387 ntBASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.08■□□□□ 0.48
CCNYL3P0C7X3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCNYL3P0C7X3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.06■□□□□ 0.48
CCNYL3P0C7X3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms