Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC175P0C221 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC175P0C221 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CCDC175P0C221 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC175P0C221 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC175P0C221 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC175P0C221 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC175P0C221 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC175P0C221 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CCDC175P0C221 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC175P0C221 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCDC175P0C221 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC175P0C221 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCDC175P0C221 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC175P0C221 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC175P0C221 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC175P0C221 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC175P0C221 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC175P0C221 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC175P0C221 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC175P0C221 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC175P0C221 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC175P0C221 AF201337.1-201ENST00000520239 748 ntBASIC20.24■□□□□ 0.83
CCDC175P0C221 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC175P0C221 AC105036.2-201ENST00000569468 176 ntBASIC20.24■□□□□ 0.83
CCDC175P0C221 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC175P0C221 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.24■□□□□ 0.83
CCDC175P0C221 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC175P0C221 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC175P0C221 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC175P0C221 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC175P0C221 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC175P0C221 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC175P0C221 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC175P0C221 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCDC175P0C221 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC175P0C221 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC175P0C221 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC175P0C221 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC175P0C221 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC175P0C221 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC175P0C221 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CCDC175P0C221 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC175P0C221 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
CCDC175P0C221 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC175P0C221 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC175P0C221 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC175P0C221 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 MTMR9LP-203ENST00000426597 1545 ntBASIC20.22■□□□□ 0.83
CCDC175P0C221 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC175P0C221 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 RCC2P6-201ENST00000526625 1557 ntBASIC20.22■□□□□ 0.83
CCDC175P0C221 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC175P0C221 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC175P0C221 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC175P0C221 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms