Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXC6P09630 AL662844.1-201ENST00000546340 181 ntBASIC21.19■□□□□ 0.98
HOXC6P09630 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC6P09630 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.19■□□□□ 0.98
HOXC6P09630 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.19■□□□□ 0.98
HOXC6P09630 AC004263.2-201ENST00000617183 678 ntBASIC21.19■□□□□ 0.98
HOXC6P09630 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.19■□□□□ 0.98
HOXC6P09630 AC023511.2-201ENST00000618803 211 ntBASIC21.19■□□□□ 0.98
HOXC6P09630 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.19■□□□□ 0.98
HOXC6P09630 AC233702.3-201ENST00000578656 1387 ntBASIC21.19■□□□□ 0.98
HOXC6P09630 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.19■□□□□ 0.98
HOXC6P09630 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC6P09630 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC6P09630 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HOXC6P09630 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC6P09630 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXC6P09630 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.18■□□□□ 0.98
HOXC6P09630 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXC6P09630 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXC6P09630 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC6P09630 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXC6P09630 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC6P09630 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.18■□□□□ 0.98
HOXC6P09630 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC6P09630 AL121912.1-201ENST00000603683 238 ntBASIC21.18■□□□□ 0.98
HOXC6P09630 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC6P09630 IGHV3-41-201ENST00000613121 348 ntBASIC21.18■□□□□ 0.98
HOXC6P09630 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
HOXC6P09630 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.18■□□□□ 0.98
HOXC6P09630 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HOXC6P09630 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.18■□□□□ 0.98
HOXC6P09630 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HOXC6P09630 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 AC125437.2-201ENST00000625180 2167 ntBASIC21.17■□□□□ 0.98
HOXC6P09630 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
HOXC6P09630 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.17■□□□□ 0.98
HOXC6P09630 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 IGHV3-47-201ENST00000425060 335 ntBASIC21.17■□□□□ 0.98
HOXC6P09630 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXC6P09630 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXC6P09630 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXC6P09630 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.17■□□□□ 0.98
HOXC6P09630 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.17■□□□□ 0.98
HOXC6P09630 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXC6P09630 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.17■□□□□ 0.98
HOXC6P09630 AL353801.3-201ENST00000609898 542 ntBASIC21.17■□□□□ 0.98
HOXC6P09630 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXC6P09630 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.17■□□□□ 0.98
HOXC6P09630 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXC6P09630 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.17■□□□□ 0.98
HOXC6P09630 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 TEX21P-204ENST00000641479 1693 ntBASIC21.17■□□□□ 0.98
HOXC6P09630 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HOXC6P09630 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HOXC6P09630 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC6P09630 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC6P09630 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HOXC6P09630 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC6P09630 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.16■□□□□ 0.98
HOXC6P09630 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC6P09630 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXC6P09630 KRT16P4-201ENST00000453883 522 ntBASIC21.16■□□□□ 0.98
HOXC6P09630 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXC6P09630 AC074051.2-201ENST00000565115 352 ntBASIC21.16■□□□□ 0.98
HOXC6P09630 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXC6P09630 GPR32P1-201ENST00000601788 811 ntBASIC21.16■□□□□ 0.98
HOXC6P09630 AC006538.3-201ENST00000612495 578 ntBASIC21.16■□□□□ 0.98
HOXC6P09630 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.16■□□□□ 0.98
HOXC6P09630 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC6P09630 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC6P09630 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXC6P09630 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC6P09630 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HOXC6P09630 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC6P09630 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC6P09630 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HOXC6P09630 KRT8P32-201ENST00000512863 1461 ntBASIC21.15■□□□□ 0.98
HOXC6P09630 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXC6P09630 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC6P09630 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC6P09630 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXC6P09630 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXC6P09630 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXC6P09630 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXC6P09630 RN7SL606P-201ENST00000472779 293 ntBASIC21.15■□□□□ 0.98
HOXC6P09630 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXC6P09630 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HOXC6P09630 Z69720.1-201ENST00000601483 472 ntBASIC21.15■□□□□ 0.98
HOXC6P09630 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms