Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC139530.3-201ENST00000620344 690 ntBASIC19.82■□□□□ 0.76
RB1P06400 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.82■□□□□ 0.76
RB1P06400 AF228730.7-201ENST00000641842 219 ntBASIC19.82■□□□□ 0.76
RB1P06400 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RB1P06400 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.82■□□□□ 0.76
RB1P06400 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.82■□□□□ 0.76
RB1P06400 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 TCF3P1-201ENST00000423021 1937 ntBASIC19.81■□□□□ 0.76
RB1P06400 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RB1P06400 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RB1P06400 MIR574-201ENST00000385209 96 ntBASIC19.81■□□□□ 0.76
RB1P06400 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.81■□□□□ 0.76
RB1P06400 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 AC009065.1-201ENST00000564055 1225 ntBASIC19.81■□□□□ 0.76
RB1P06400 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.81■□□□□ 0.76
RB1P06400 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.81■□□□□ 0.76
RB1P06400 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.81■□□□□ 0.76
RB1P06400 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RB1P06400 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.81■□□□□ 0.76
RB1P06400 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RB1P06400 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.81■□□□□ 0.76
RB1P06400 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.81■□□□□ 0.76
RB1P06400 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.81■□□□□ 0.76
RB1P06400 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RB1P06400 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RB1P06400 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RB1P06400 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RB1P06400 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RB1P06400 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.8■□□□□ 0.76
RB1P06400 KRT8P32-201ENST00000512863 1461 ntBASIC19.8■□□□□ 0.76
RB1P06400 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RB1P06400 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RB1P06400 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.8■□□□□ 0.76
RB1P06400 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RB1P06400 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RB1P06400 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RB1P06400 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RB1P06400 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.8■□□□□ 0.76
RB1P06400 RNA5SP419-201ENST00000515908 135 ntBASIC19.8■□□□□ 0.76
RB1P06400 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.8■□□□□ 0.76
RB1P06400 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.8■□□□□ 0.76
RB1P06400 AL773604.1-201ENST00000617417 272 ntBASIC19.8■□□□□ 0.76
RB1P06400 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RB1P06400 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.8■□□□□ 0.76
RB1P06400 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RB1P06400 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RB1P06400 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.8■□□□□ 0.76
RB1P06400 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.79■□□□□ 0.76
RB1P06400 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RB1P06400 IL9RP2-201ENST00000423948 1312 ntBASIC19.79■□□□□ 0.76
RB1P06400 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RB1P06400 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RB1P06400 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RB1P06400 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RB1P06400 NUS1P2-201ENST00000417358 873 ntBASIC19.79■□□□□ 0.76
RB1P06400 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.79■□□□□ 0.76
RB1P06400 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.79■□□□□ 0.76
RB1P06400 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RB1P06400 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.79■□□□□ 0.76
RB1P06400 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.79■□□□□ 0.76
RB1P06400 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RB1P06400 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.79■□□□□ 0.76
RB1P06400 AC011840.4-201ENST00000578471 627 ntBASIC19.79■□□□□ 0.76
RB1P06400 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RB1P06400 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RB1P06400 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RB1P06400 AL353692.3-201ENST00000407031 1396 ntBASIC19.79■□□□□ 0.76
RB1P06400 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RB1P06400 Z82202.1-201ENST00000623446 1880 ntBASIC19.79■□□□□ 0.76
RB1P06400 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RB1P06400 AC006333.2-201ENST00000607957 2099 ntBASIC19.79■□□□□ 0.76
RB1P06400 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RB1P06400 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.78■□□□□ 0.76
RB1P06400 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.78■□□□□ 0.76
RB1P06400 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RB1P06400 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.78■□□□□ 0.76
RB1P06400 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 KRT18P13-201ENST00000400056 1290 ntBASIC19.78■□□□□ 0.76
RB1P06400 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.78■□□□□ 0.76
RB1P06400 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.78■□□□□ 0.76
RB1P06400 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RB1P06400 MINOS1P3-201ENST00000457048 203 ntBASIC19.78■□□□□ 0.76
RB1P06400 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.78■□□□□ 0.76
RB1P06400 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.78■□□□□ 0.76
RB1P06400 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms