Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
CD74P04233 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.77■□□□□ 0.11
CD74P04233 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.11
CD74P04233 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD74P04233 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.76■□□□□ 0.11
CD74P04233 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.76■□□□□ 0.11
CD74P04233 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.76■□□□□ 0.11
CD74P04233 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CD74P04233 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.76■□□□□ 0.11
CD74P04233 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.76■□□□□ 0.11
CD74P04233 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CD74P04233 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 AC016769.1-201ENST00000409132 1010 ntBASIC15.76■□□□□ 0.11
CD74P04233 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.76■□□□□ 0.11
CD74P04233 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.76■□□□□ 0.11
CD74P04233 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CD74P04233 AC006557.6-201ENST00000623071 864 ntBASIC15.76■□□□□ 0.11
CD74P04233 AC090340.1-201ENST00000620778 4980 ntBASIC15.76■□□□□ 0.11
CD74P04233 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CD74P04233 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CD74P04233 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.76■□□□□ 0.11
CD74P04233 KRT8P45-201ENST00000414328 1447 ntBASIC15.76■□□□□ 0.11
CD74P04233 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.76■□□□□ 0.11
CD74P04233 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.76■□□□□ 0.11
CD74P04233 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CD74P04233 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD74P04233 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.75■□□□□ 0.11
CD74P04233 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CD74P04233 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.75■□□□□ 0.11
CD74P04233 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CD74P04233 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.75■□□□□ 0.11
CD74P04233 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CD74P04233 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.75■□□□□ 0.11
CD74P04233 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.75■□□□□ 0.11
CD74P04233 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
CD74P04233 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.75■□□□□ 0.11
CD74P04233 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.75■□□□□ 0.11
CD74P04233 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.75■□□□□ 0.11
CD74P04233 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.75■□□□□ 0.11
CD74P04233 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.75■□□□□ 0.11
CD74P04233 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.75■□□□□ 0.11
CD74P04233 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.75■□□□□ 0.11
CD74P04233 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD74P04233 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.74■□□□□ 0.11
CD74P04233 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 FLJ13224-201ENST00000313737 1514 ntBASIC15.74■□□□□ 0.11
CD74P04233 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CD74P04233 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CD74P04233 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.74■□□□□ 0.11
CD74P04233 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.74■□□□□ 0.11
CD74P04233 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.74■□□□□ 0.11
CD74P04233 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CD74P04233 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.74■□□□□ 0.11
CD74P04233 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC15.74■□□□□ 0.11
CD74P04233 AC006015.1-201ENST00000429970 570 ntBASIC15.74■□□□□ 0.11
CD74P04233 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.74■□□□□ 0.11
CD74P04233 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
CD74P04233 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.74■□□□□ 0.11
CD74P04233 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CD74P04233 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD74P04233 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CD74P04233 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.74■□□□□ 0.11
CD74P04233 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms