Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV3P03979 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRGV3P03979 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV3P03979 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV3P03979 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.77□□□□□ -0.04
TRGV3P03979 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV3P03979 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV3P03979 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRGV3P03979 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
TRGV3P03979 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.77□□□□□ -0.05
TRGV3P03979 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.77□□□□□ -0.05
TRGV3P03979 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV3P03979 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV3P03979 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV3P03979 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV3P03979 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV3P03979 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV3P03979 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV3P03979 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRGV3P03979 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRGV3P03979 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.77□□□□□ -0.05
TRGV3P03979 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV3P03979 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TRGV3P03979 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 OR6D1P-202ENST00000641007 5290 ntBASIC14.76□□□□□ -0.05
TRGV3P03979 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRGV3P03979 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.76□□□□□ -0.05
TRGV3P03979 CCR12P-201ENST00000446203 998 ntBASIC14.76□□□□□ -0.05
TRGV3P03979 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.76□□□□□ -0.05
TRGV3P03979 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 CA15P1-201ENST00000481698 905 ntBASIC14.76□□□□□ -0.05
TRGV3P03979 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.76□□□□□ -0.05
TRGV3P03979 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
TRGV3P03979 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
TRGV3P03979 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.76□□□□□ -0.05
TRGV3P03979 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRGV3P03979 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
TRGV3P03979 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.75□□□□□ -0.05
TRGV3P03979 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRGV3P03979 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.75□□□□□ -0.05
TRGV3P03979 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRGV3P03979 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.75□□□□□ -0.05
TRGV3P03979 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.75□□□□□ -0.05
TRGV3P03979 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.75□□□□□ -0.05
TRGV3P03979 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.75□□□□□ -0.05
TRGV3P03979 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.75□□□□□ -0.05
TRGV3P03979 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRGV3P03979 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
TRGV3P03979 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 KRT8P3-201ENST00000519669 1449 ntBASIC14.75□□□□□ -0.05
TRGV3P03979 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRGV3P03979 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRGV3P03979 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms