Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.97■□□□□ 0.31
SPTA1P02549 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPTA1P02549 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPTA1P02549 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.97■□□□□ 0.31
SPTA1P02549 AC083906.6-201ENST00000641366 219 ntBASIC16.97■□□□□ 0.31
SPTA1P02549 AC079781.4-201ENST00000641908 219 ntBASIC16.97■□□□□ 0.31
SPTA1P02549 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPTA1P02549 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.96■□□□□ 0.31
SPTA1P02549 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
SPTA1P02549 ZNF815P-204ENST00000434898 1737 ntBASIC16.96■□□□□ 0.31
SPTA1P02549 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.96■□□□□ 0.31
SPTA1P02549 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SPTA1P02549 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.96■□□□□ 0.31
SPTA1P02549 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.96■□□□□ 0.31
SPTA1P02549 KRT18P23-201ENST00000435622 1283 ntBASIC16.96■□□□□ 0.31
SPTA1P02549 CYMP-203ENST00000474680 1263 ntBASIC16.96■□□□□ 0.31
SPTA1P02549 AC093909.1-201ENST00000504731 1122 ntBASIC16.96■□□□□ 0.31
SPTA1P02549 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.96■□□□□ 0.31
SPTA1P02549 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.96■□□□□ 0.31
SPTA1P02549 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.96■□□□□ 0.31
SPTA1P02549 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 AC009237.14-201ENST00000609975 1594 ntBASIC16.96■□□□□ 0.31
SPTA1P02549 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPTA1P02549 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.96■□□□□ 0.31
SPTA1P02549 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.96■□□□□ 0.3
SPTA1P02549 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SPTA1P02549 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.96■□□□□ 0.3
SPTA1P02549 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
SPTA1P02549 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
SPTA1P02549 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SPTA1P02549 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.95■□□□□ 0.3
SPTA1P02549 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.95■□□□□ 0.3
SPTA1P02549 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.95■□□□□ 0.3
SPTA1P02549 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.95■□□□□ 0.3
SPTA1P02549 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SPTA1P02549 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.95■□□□□ 0.3
SPTA1P02549 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 FAM8A3P-201ENST00000427218 844 ntBASIC16.95■□□□□ 0.3
SPTA1P02549 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.95■□□□□ 0.3
SPTA1P02549 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.95■□□□□ 0.3
SPTA1P02549 AC145285.3-201ENST00000564603 959 ntBASIC16.95■□□□□ 0.3
SPTA1P02549 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.95■□□□□ 0.3
SPTA1P02549 AC010327.4-202ENST00000591484 748 ntBASIC16.95■□□□□ 0.3
SPTA1P02549 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.95■□□□□ 0.3
SPTA1P02549 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SPTA1P02549 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.95■□□□□ 0.3
SPTA1P02549 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.95■□□□□ 0.3
SPTA1P02549 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.95■□□□□ 0.3
SPTA1P02549 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.95■□□□□ 0.3
SPTA1P02549 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SPTA1P02549 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SPTA1P02549 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SPTA1P02549 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPTA1P02549 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.95■□□□□ 0.3
SPTA1P02549 AC073648.2-201ENST00000510116 352 ntBASIC16.95■□□□□ 0.3
SPTA1P02549 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.95■□□□□ 0.3
SPTA1P02549 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.95■□□□□ 0.3
SPTA1P02549 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.94■□□□□ 0.3
SPTA1P02549 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPTA1P02549 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPTA1P02549 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPTA1P02549 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.94■□□□□ 0.3
SPTA1P02549 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.94■□□□□ 0.3
SPTA1P02549 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SPTA1P02549 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.94■□□□□ 0.3
SPTA1P02549 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
SPTA1P02549 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPTA1P02549 KRT8P3-201ENST00000519669 1449 ntBASIC16.94■□□□□ 0.3
SPTA1P02549 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.94■□□□□ 0.3
SPTA1P02549 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SPTA1P02549 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPTA1P02549 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPTA1P02549 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SPTA1P02549 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SPTA1P02549 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms