Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 KRT8P45-201ENST00000414328 1447 ntBASIC20.15■□□□□ 0.82
HLA-DRAP01903 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.15■□□□□ 0.82
HLA-DRAP01903 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.15■□□□□ 0.82
HLA-DRAP01903 AL138781.2-201ENST00000617896 1843 ntBASIC20.15■□□□□ 0.82
HLA-DRAP01903 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HLA-DRAP01903 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DRAP01903 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HLA-DRAP01903 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HLA-DRAP01903 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HLA-DRAP01903 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DRAP01903 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DRAP01903 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DRAP01903 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DRAP01903 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DRAP01903 HMGA1P5-201ENST00000412453 271 ntBASIC20.14■□□□□ 0.81
HLA-DRAP01903 AC211429.1-201ENST00000415277 523 ntBASIC20.14■□□□□ 0.81
HLA-DRAP01903 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 AC097493.4-201ENST00000641197 219 ntBASIC20.14■□□□□ 0.81
HLA-DRAP01903 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DRAP01903 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HLA-DRAP01903 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DRAP01903 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DRAP01903 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DRAP01903 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DRAP01903 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DRAP01903 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DRAP01903 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DRAP01903 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DRAP01903 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DRAP01903 AL020996.1-203ENST00000536896 2307 ntBASIC20.13■□□□□ 0.81
HLA-DRAP01903 AL499627.1-201ENST00000569373 2188 ntBASIC20.13■□□□□ 0.81
HLA-DRAP01903 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DRAP01903 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DRAP01903 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.13■□□□□ 0.81
HLA-DRAP01903 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 WWOX-216ENST00000569818 525 ntBASIC20.12■□□□□ 0.81
HLA-DRAP01903 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DRAP01903 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
HLA-DRAP01903 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DRAP01903 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DRAP01903 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms