Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.26■□□□□ 0.83
TIMP1P01033 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.26■□□□□ 0.83
TIMP1P01033 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.25■□□□□ 0.83
TIMP1P01033 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 KRT8P32-201ENST00000512863 1461 ntBASIC20.25■□□□□ 0.83
TIMP1P01033 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 AC005104.2-201ENST00000427818 678 ntBASIC20.25■□□□□ 0.83
TIMP1P01033 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TIMP1P01033 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.25■□□□□ 0.83
TIMP1P01033 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.25■□□□□ 0.83
TIMP1P01033 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.25■□□□□ 0.83
TIMP1P01033 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.25■□□□□ 0.83
TIMP1P01033 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 AC114341.1-201ENST00000618070 349 ntBASIC20.25■□□□□ 0.83
TIMP1P01033 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TIMP1P01033 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TIMP1P01033 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TIMP1P01033 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.25■□□□□ 0.83
TIMP1P01033 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.25■□□□□ 0.83
TIMP1P01033 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TIMP1P01033 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TIMP1P01033 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.24■□□□□ 0.83
TIMP1P01033 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.24■□□□□ 0.83
TIMP1P01033 GABARAPL3-202ENST00000624044 1851 ntBASIC20.24■□□□□ 0.83
TIMP1P01033 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TIMP1P01033 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TIMP1P01033 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.24■□□□□ 0.83
TIMP1P01033 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.24■□□□□ 0.83
TIMP1P01033 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.24■□□□□ 0.83
TIMP1P01033 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.24■□□□□ 0.83
TIMP1P01033 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TIMP1P01033 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TIMP1P01033 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.24■□□□□ 0.83
TIMP1P01033 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.24■□□□□ 0.83
TIMP1P01033 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.24■□□□□ 0.83
TIMP1P01033 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
TIMP1P01033 MIR7706-201ENST00000613747 67 ntBASIC20.24■□□□□ 0.83
TIMP1P01033 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.24■□□□□ 0.83
TIMP1P01033 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TIMP1P01033 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TIMP1P01033 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TIMP1P01033 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TIMP1P01033 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TIMP1P01033 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TIMP1P01033 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TIMP1P01033 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TIMP1P01033 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TIMP1P01033 TREX1-205ENST00000625293 1783 ntBASIC20.23■□□□□ 0.83
TIMP1P01033 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TIMP1P01033 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.23■□□□□ 0.83
TIMP1P01033 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
TIMP1P01033 AC073648.2-201ENST00000510116 352 ntBASIC20.23■□□□□ 0.83
TIMP1P01033 AC096582.2-201ENST00000510860 516 ntBASIC20.23■□□□□ 0.83
TIMP1P01033 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.23■□□□□ 0.83
TIMP1P01033 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.23■□□□□ 0.83
TIMP1P01033 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.23■□□□□ 0.83
TIMP1P01033 Z82202.1-201ENST00000623446 1880 ntBASIC20.23■□□□□ 0.83
TIMP1P01033 FAM215A-202ENST00000632077 792 ntBASIC20.23■□□□□ 0.83
TIMP1P01033 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.23■□□□□ 0.83
TIMP1P01033 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TIMP1P01033 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.22■□□□□ 0.83
TIMP1P01033 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.22■□□□□ 0.83
TIMP1P01033 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TIMP1P01033 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TIMP1P01033 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.22■□□□□ 0.83
TIMP1P01033 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.22■□□□□ 0.83
TIMP1P01033 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TIMP1P01033 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.22■□□□□ 0.83
TIMP1P01033 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
TIMP1P01033 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.22■□□□□ 0.83
TIMP1P01033 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.22■□□□□ 0.83
TIMP1P01033 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TIMP1P01033 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.22■□□□□ 0.83
TIMP1P01033 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.22■□□□□ 0.83
TIMP1P01033 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.22■□□□□ 0.83
TIMP1P01033 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TIMP1P01033 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TIMP1P01033 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TIMP1P01033 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TIMP1P01033 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.22■□□□□ 0.83
TIMP1P01033 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.22■□□□□ 0.83
TIMP1P01033 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TIMP1P01033 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms