Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCF11O94913 DRAXINP1-201ENST00000437611 948 ntBASIC29.25■■■□□ 2.27
PCF11O94913 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC29.25■■■□□ 2.27
PCF11O94913 AC092329.2-201ENST00000598402 547 ntBASIC29.25■■■□□ 2.27
PCF11O94913 GPR32P1-201ENST00000601788 811 ntBASIC29.25■■■□□ 2.27
PCF11O94913 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCF11O94913 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC29.25■■■□□ 2.27
PCF11O94913 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC29.25■■■□□ 2.27
PCF11O94913 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC29.24■■■□□ 2.27
PCF11O94913 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC29.24■■■□□ 2.27
PCF11O94913 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC29.24■■■□□ 2.27
PCF11O94913 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PCF11O94913 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PCF11O94913 BAALC-202ENST00000306391 243 ntTSL 5 BASIC29.24■■■□□ 2.27
PCF11O94913 BAALC-204ENST00000330955 222 ntTSL 5 BASIC29.24■■■□□ 2.27
PCF11O94913 AL732292.2-201ENST00000609649 430 ntBASIC29.24■■■□□ 2.27
PCF11O94913 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PCF11O94913 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
PCF11O94913 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC29.24■■■□□ 2.27
PCF11O94913 Z83836.1-201ENST00000624605 1642 ntBASIC29.24■■■□□ 2.27
PCF11O94913 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
PCF11O94913 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC29.24■■■□□ 2.27
PCF11O94913 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
PCF11O94913 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCF11O94913 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCF11O94913 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCF11O94913 AL032819.2-201ENST00000624543 2162 ntBASIC29.23■■■□□ 2.27
PCF11O94913 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PCF11O94913 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC29.23■■■□□ 2.27
PCF11O94913 MIR3652-201ENST00000579335 131 ntBASIC29.23■■■□□ 2.27
PCF11O94913 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC29.23■■■□□ 2.27
PCF11O94913 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC29.23■■■□□ 2.27
PCF11O94913 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
PCF11O94913 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC29.23■■■□□ 2.27
PCF11O94913 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC29.23■■■□□ 2.27
PCF11O94913 AC093484.2-201ENST00000580996 2166 ntBASIC29.23■■■□□ 2.27
PCF11O94913 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PCF11O94913 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PCF11O94913 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCF11O94913 AC009078.2-202ENST00000463353 338 ntBASIC29.22■■■□□ 2.27
PCF11O94913 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC29.22■■■□□ 2.27
PCF11O94913 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
PCF11O94913 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC29.22■■■□□ 2.27
PCF11O94913 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC29.22■■■□□ 2.27
PCF11O94913 AL671883.3-201ENST00000603274 991 ntBASIC29.22■■■□□ 2.27
PCF11O94913 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PCF11O94913 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC29.22■■■□□ 2.27
PCF11O94913 NFYC-AS1-201ENST00000606277 1687 ntBASIC29.22■■■□□ 2.27
PCF11O94913 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PCF11O94913 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC29.22■■■□□ 2.27
PCF11O94913 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PCF11O94913 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC29.22■■■□□ 2.27
PCF11O94913 TOB2P1-201ENST00000469761 992 ntBASIC29.22■■■□□ 2.27
PCF11O94913 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC29.22■■■□□ 2.27
PCF11O94913 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PCF11O94913 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC29.21■■■□□ 2.27
PCF11O94913 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC29.21■■■□□ 2.27
PCF11O94913 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCF11O94913 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCF11O94913 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCF11O94913 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC29.21■■■□□ 2.27
PCF11O94913 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC29.21■■■□□ 2.27
PCF11O94913 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCF11O94913 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC29.21■■■□□ 2.27
PCF11O94913 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC29.21■■■□□ 2.27
PCF11O94913 NAA38-203ENST00000575071 553 ntTSL 2 BASIC29.21■■■□□ 2.27
PCF11O94913 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
PCF11O94913 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCF11O94913 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PCF11O94913 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
PCF11O94913 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PCF11O94913 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
PCF11O94913 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
PCF11O94913 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC29.2■■■□□ 2.27
PCF11O94913 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PCF11O94913 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.27
PCF11O94913 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
PCF11O94913 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PCF11O94913 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC29.2■■■□□ 2.26
PCF11O94913 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC29.2■■■□□ 2.26
PCF11O94913 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC29.2■■■□□ 2.26
PCF11O94913 KRT18P41-201ENST00000518924 1277 ntBASIC29.2■■■□□ 2.26
PCF11O94913 MPI-205ENST00000562606 1052 ntTSL 3 BASIC29.2■■■□□ 2.26
PCF11O94913 AC012615.1-201ENST00000565797 1299 ntBASIC29.2■■■□□ 2.26
PCF11O94913 AL161938.1-201ENST00000569833 2180 ntBASIC29.2■■■□□ 2.26
PCF11O94913 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC29.19■■■□□ 2.26
PCF11O94913 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCF11O94913 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
PCF11O94913 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
PCF11O94913 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCF11O94913 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
PCF11O94913 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCF11O94913 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
PCF11O94913 AL049812.1-201ENST00000432563 2267 ntBASIC29.19■■■□□ 2.26
PCF11O94913 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PCF11O94913 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC29.18■■■□□ 2.26
PCF11O94913 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC29.18■■■□□ 2.26
PCF11O94913 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCF11O94913 MIR3180-4-201ENST00000582223 153 ntBASIC29.18■■■□□ 2.26
PCF11O94913 AL592071.1-201ENST00000611956 408 ntBASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms