Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LTN1O94822 NUS1P2-201ENST00000417358 873 ntBASIC24.86■■□□□ 1.57
LTN1O94822 IGHV3-47-201ENST00000425060 335 ntBASIC24.86■■□□□ 1.57
LTN1O94822 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC24.86■■□□□ 1.57
LTN1O94822 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC24.86■■□□□ 1.57
LTN1O94822 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
LTN1O94822 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.86■■□□□ 1.57
LTN1O94822 AC004263.2-201ENST00000617183 678 ntBASIC24.86■■□□□ 1.57
LTN1O94822 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LTN1O94822 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.86■■□□□ 1.57
LTN1O94822 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC24.86■■□□□ 1.57
LTN1O94822 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LTN1O94822 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.86■■□□□ 1.57
LTN1O94822 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
LTN1O94822 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
LTN1O94822 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.85■■□□□ 1.57
LTN1O94822 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
LTN1O94822 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 MIR564-202ENST00000385049 94 ntBASIC24.85■■□□□ 1.57
LTN1O94822 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC24.85■■□□□ 1.57
LTN1O94822 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC24.85■■□□□ 1.57
LTN1O94822 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC24.85■■□□□ 1.57
LTN1O94822 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC24.85■■□□□ 1.57
LTN1O94822 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC24.85■■□□□ 1.57
LTN1O94822 SAPCD2P3-201ENST00000455031 850 ntBASIC24.85■■□□□ 1.57
LTN1O94822 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
LTN1O94822 REXO1L6P-202ENST00000619970 1078 ntBASIC24.85■■□□□ 1.57
LTN1O94822 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
LTN1O94822 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
LTN1O94822 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LTN1O94822 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.84■■□□□ 1.57
LTN1O94822 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LTN1O94822 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LTN1O94822 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
LTN1O94822 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LTN1O94822 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LTN1O94822 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC24.84■■□□□ 1.57
LTN1O94822 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC24.84■■□□□ 1.57
LTN1O94822 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC24.84■■□□□ 1.57
LTN1O94822 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC24.84■■□□□ 1.57
LTN1O94822 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC24.84■■□□□ 1.57
LTN1O94822 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LTN1O94822 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LTN1O94822 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LTN1O94822 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LTN1O94822 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LTN1O94822 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24.83■■□□□ 1.57
LTN1O94822 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
LTN1O94822 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LTN1O94822 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
LTN1O94822 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC24.83■■□□□ 1.57
LTN1O94822 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
LTN1O94822 AC124864.1-201ENST00000623408 392 ntBASIC24.83■■□□□ 1.57
LTN1O94822 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LTN1O94822 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
LTN1O94822 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LTN1O94822 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LTN1O94822 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.83■■□□□ 1.57
LTN1O94822 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
LTN1O94822 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
LTN1O94822 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
LTN1O94822 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC24.83■■□□□ 1.56
LTN1O94822 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LTN1O94822 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
LTN1O94822 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
LTN1O94822 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC24.82■■□□□ 1.56
LTN1O94822 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC24.82■■□□□ 1.56
LTN1O94822 AL121772.3-201ENST00000610840 674 ntBASIC24.82■■□□□ 1.56
LTN1O94822 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.82■■□□□ 1.56
LTN1O94822 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC24.82■■□□□ 1.56
LTN1O94822 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
LTN1O94822 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LTN1O94822 HES2-202ENST00000377836 507 ntTSL 2 BASIC24.82■■□□□ 1.56
LTN1O94822 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC24.82■■□□□ 1.56
LTN1O94822 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
LTN1O94822 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC24.82■■□□□ 1.56
LTN1O94822 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC24.82■■□□□ 1.56
LTN1O94822 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.82■■□□□ 1.56
LTN1O94822 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.82■■□□□ 1.56
LTN1O94822 AL357033.4-201ENST00000617703 1807 ntBASIC24.82■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms