Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.03■□□□□ 0.32
CLPXO76031 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CLPXO76031 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPXO76031 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.03■□□□□ 0.32
CLPXO76031 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CLPXO76031 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.03■□□□□ 0.32
CLPXO76031 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLPXO76031 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
CLPXO76031 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLPXO76031 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CLPXO76031 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLPXO76031 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CLPXO76031 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CLPXO76031 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.02■□□□□ 0.32
CLPXO76031 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 AC108860.2-201ENST00000562760 2183 ntBASIC17.02■□□□□ 0.32
CLPXO76031 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.02■□□□□ 0.32
CLPXO76031 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.02■□□□□ 0.32
CLPXO76031 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CLPXO76031 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CLPXO76031 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.02■□□□□ 0.32
CLPXO76031 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CLPXO76031 MFSD11-216ENST00000590393 1141 ntBASIC17.02■□□□□ 0.32
CLPXO76031 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CLPXO76031 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLPXO76031 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CLPXO76031 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CLPXO76031 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLPXO76031 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CLPXO76031 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.02■□□□□ 0.31
CLPXO76031 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLPXO76031 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLPXO76031 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CLPXO76031 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CLPXO76031 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPXO76031 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPXO76031 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
CLPXO76031 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CLPXO76031 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CLPXO76031 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CLPXO76031 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.01■□□□□ 0.31
CLPXO76031 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLPXO76031 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17■□□□□ 0.31
CLPXO76031 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17■□□□□ 0.31
CLPXO76031 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CLPXO76031 AL355802.2-201ENST00000402069 882 ntBASIC17■□□□□ 0.31
CLPXO76031 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLPXO76031 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17■□□□□ 0.31
CLPXO76031 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 AC013268.1-206ENST00000638368 961 ntBASIC17■□□□□ 0.31
CLPXO76031 AC112229.1-201ENST00000639295 961 ntBASIC17■□□□□ 0.31
CLPXO76031 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17■□□□□ 0.31
CLPXO76031 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17■□□□□ 0.31
CLPXO76031 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLPXO76031 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms