Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDH7O60245 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 RPS2P55-201ENST00000397318 883 ntBASIC17.92■□□□□ 0.46
PCDH7O60245 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH7O60245 AC107956.1-201ENST00000494359 873 ntBASIC17.92■□□□□ 0.46
PCDH7O60245 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH7O60245 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH7O60245 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.92■□□□□ 0.46
PCDH7O60245 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDH7O60245 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH7O60245 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.92■□□□□ 0.46
PCDH7O60245 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PCDH7O60245 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDH7O60245 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH7O60245 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH7O60245 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH7O60245 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH7O60245 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH7O60245 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH7O60245 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 ABHD17AP1-201ENST00000358206 933 ntBASIC17.91■□□□□ 0.46
PCDH7O60245 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDH7O60245 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH7O60245 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 AC012618.2-201ENST00000428058 849 ntBASIC17.91■□□□□ 0.46
PCDH7O60245 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH7O60245 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 NUDT16P1-203ENST00000513809 620 ntBASIC17.91■□□□□ 0.46
PCDH7O60245 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH7O60245 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH7O60245 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDH7O60245 AP000692.2-201ENST00000608391 879 ntBASIC17.91■□□□□ 0.46
PCDH7O60245 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDH7O60245 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH7O60245 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH7O60245 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH7O60245 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDH7O60245 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH7O60245 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDH7O60245 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDH7O60245 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDH7O60245 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDH7O60245 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH7O60245 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDH7O60245 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDH7O60245 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH7O60245 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH7O60245 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.9■□□□□ 0.46
PCDH7O60245 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.9■□□□□ 0.46
PCDH7O60245 AP001412.1-201ENST00000608405 714 ntBASIC17.9■□□□□ 0.46
PCDH7O60245 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDH7O60245 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDH7O60245 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDH7O60245 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms