Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA2O43364 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.05■□□□□ 0.8
HOXA2O43364 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA2O43364 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 AL390719.2-201ENST00000606993 987 ntBASIC20.05■□□□□ 0.8
HOXA2O43364 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HOXA2O43364 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA2O43364 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA2O43364 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HOXA2O43364 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXA2O43364 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXA2O43364 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA2O43364 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA2O43364 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA2O43364 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA2O43364 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA2O43364 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXA2O43364 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HOXA2O43364 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA2O43364 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA2O43364 TOB2P1-201ENST00000469761 992 ntBASIC20.04■□□□□ 0.8
HOXA2O43364 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HOXA2O43364 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HOXA2O43364 GPR32P1-201ENST00000601788 811 ntBASIC20.04■□□□□ 0.8
HOXA2O43364 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HOXA2O43364 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA2O43364 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HOXA2O43364 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA2O43364 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA2O43364 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA2O43364 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA2O43364 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA2O43364 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HOXA2O43364 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA2O43364 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA2O43364 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA2O43364 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 AC125437.2-201ENST00000625180 2167 ntBASIC20.03■□□□□ 0.8
HOXA2O43364 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HOXA2O43364 AL845331.1-201ENST00000424978 1190 ntBASIC20.03■□□□□ 0.8
HOXA2O43364 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
HOXA2O43364 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA2O43364 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.03■□□□□ 0.8
HOXA2O43364 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA2O43364 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.03■□□□□ 0.8
HOXA2O43364 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA2O43364 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA2O43364 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 IGHV3-41-201ENST00000613121 348 ntBASIC20.03■□□□□ 0.8
HOXA2O43364 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA2O43364 AC068587.9-201ENST00000641814 219 ntBASIC20.03■□□□□ 0.8
HOXA2O43364 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HOXA2O43364 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.03■□□□□ 0.8
HOXA2O43364 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA2O43364 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
HOXA2O43364 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA2O43364 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA2O43364 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HOXA2O43364 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA2O43364 TSPY19P-201ENST00000418461 509 ntBASIC20.02■□□□□ 0.8
HOXA2O43364 TSPY18P-201ENST00000441642 509 ntBASIC20.02■□□□□ 0.8
HOXA2O43364 KRT17P6-201ENST00000453795 1220 ntBASIC20.02■□□□□ 0.8
HOXA2O43364 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.02■□□□□ 0.8
HOXA2O43364 AC091304.2-201ENST00000564639 760 ntBASIC20.02■□□□□ 0.8
HOXA2O43364 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXA2O43364 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.02■□□□□ 0.8
HOXA2O43364 AC024563.2-201ENST00000603282 481 ntBASIC20.02■□□□□ 0.8
HOXA2O43364 IFNL4P1-201ENST00000607083 540 ntBASIC20.02■□□□□ 0.8
HOXA2O43364 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA2O43364 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA2O43364 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HOXA2O43364 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA2O43364 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HOXA2O43364 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXA2O43364 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HOXA2O43364 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HOXA2O43364 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HOXA2O43364 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HOXA2O43364 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HOXA2O43364 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.02■□□□□ 0.79
HOXA2O43364 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.02■□□□□ 0.79
HOXA2O43364 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXA2O43364 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms