Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
PAX4O43316 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.41□□□□□ -0.26
PAX4O43316 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 KRT8P41-201ENST00000533985 1514 ntBASIC13.41□□□□□ -0.26
PAX4O43316 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.41□□□□□ -0.26
PAX4O43316 FAM207BP-201ENST00000447172 505 ntBASIC13.41□□□□□ -0.26
PAX4O43316 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.41□□□□□ -0.26
PAX4O43316 AC091390.4-202ENST00000476426 537 ntBASIC13.41□□□□□ -0.26
PAX4O43316 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.41□□□□□ -0.26
PAX4O43316 NUDT16P1-203ENST00000513809 620 ntBASIC13.41□□□□□ -0.26
PAX4O43316 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
PAX4O43316 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.41□□□□□ -0.26
PAX4O43316 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.41□□□□□ -0.26
PAX4O43316 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.41□□□□□ -0.26
PAX4O43316 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC13.41□□□□□ -0.26
PAX4O43316 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.41□□□□□ -0.26
PAX4O43316 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.41□□□□□ -0.26
PAX4O43316 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
PAX4O43316 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.41□□□□□ -0.26
PAX4O43316 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
PAX4O43316 AP000974.1-201ENST00000623909 2387 ntBASIC13.4□□□□□ -0.26
PAX4O43316 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.4□□□□□ -0.26
PAX4O43316 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 FP475955.4-201ENST00000623131 1990 ntBASIC13.4□□□□□ -0.26
PAX4O43316 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.4□□□□□ -0.26
PAX4O43316 OR6D1P-203ENST00000641209 4860 ntBASIC13.4□□□□□ -0.26
PAX4O43316 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PAX4O43316 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PAX4O43316 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
PAX4O43316 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
PAX4O43316 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.4□□□□□ -0.26
PAX4O43316 TSPY23P-201ENST00000440136 739 ntBASIC13.4□□□□□ -0.26
PAX4O43316 PRSS44-201ENST00000515154 1146 ntBASIC13.4□□□□□ -0.26
PAX4O43316 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.4□□□□□ -0.26
PAX4O43316 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.4□□□□□ -0.26
PAX4O43316 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.4□□□□□ -0.26
PAX4O43316 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.4□□□□□ -0.26
PAX4O43316 MIR4785-201ENST00000585005 73 ntBASIC13.4□□□□□ -0.26
PAX4O43316 AC026471.5-201ENST00000615068 467 ntBASIC13.4□□□□□ -0.26
PAX4O43316 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.4□□□□□ -0.26
PAX4O43316 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
PAX4O43316 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
PAX4O43316 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.4□□□□□ -0.26
PAX4O43316 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC13.4□□□□□ -0.26
PAX4O43316 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
PAX4O43316 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
PAX4O43316 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
PAX4O43316 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
PAX4O43316 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.39□□□□□ -0.27
PAX4O43316 KRT17P2-201ENST00000300992 1314 ntBASIC13.39□□□□□ -0.27
PAX4O43316 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PAX4O43316 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.39□□□□□ -0.27
PAX4O43316 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PAX4O43316 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
PAX4O43316 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
PAX4O43316 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PAX4O43316 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
PAX4O43316 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
PAX4O43316 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms