Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.81■□□□□ 0.44
UPK1AO00322 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
UPK1AO00322 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
UPK1AO00322 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
UPK1AO00322 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.81■□□□□ 0.44
UPK1AO00322 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.81■□□□□ 0.44
UPK1AO00322 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.81■□□□□ 0.44
UPK1AO00322 AL031985.4-201ENST00000642138 673 ntBASIC17.81■□□□□ 0.44
UPK1AO00322 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.81■□□□□ 0.44
UPK1AO00322 RCC2P6-201ENST00000526625 1557 ntBASIC17.81■□□□□ 0.44
UPK1AO00322 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.81■□□□□ 0.44
UPK1AO00322 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
UPK1AO00322 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
UPK1AO00322 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPK1AO00322 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.8■□□□□ 0.44
UPK1AO00322 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.8■□□□□ 0.44
UPK1AO00322 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.8■□□□□ 0.44
UPK1AO00322 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UPK1AO00322 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
UPK1AO00322 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UPK1AO00322 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
UPK1AO00322 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 AC091390.4-202ENST00000476426 537 ntBASIC17.8■□□□□ 0.44
UPK1AO00322 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
UPK1AO00322 AC026271.3-201ENST00000571884 352 ntBASIC17.8■□□□□ 0.44
UPK1AO00322 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
UPK1AO00322 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPK1AO00322 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1AO00322 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
UPK1AO00322 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1AO00322 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UPK1AO00322 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1AO00322 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.79■□□□□ 0.44
UPK1AO00322 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.79■□□□□ 0.44
UPK1AO00322 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1AO00322 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
UPK1AO00322 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.79■□□□□ 0.44
UPK1AO00322 FAM197Y1-201ENST00000421178 764 ntBASIC17.79■□□□□ 0.44
UPK1AO00322 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
UPK1AO00322 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.79■□□□□ 0.44
UPK1AO00322 TMEM191A-211ENST00000637163 1067 ntBASIC17.79■□□□□ 0.44
UPK1AO00322 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UPK1AO00322 KRT8P11-201ENST00000409686 1436 ntBASIC17.79■□□□□ 0.44
UPK1AO00322 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.79■□□□□ 0.44
UPK1AO00322 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1AO00322 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1AO00322 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.79■□□□□ 0.44
UPK1AO00322 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1AO00322 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPK1AO00322 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
UPK1AO00322 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.78■□□□□ 0.44
UPK1AO00322 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.78■□□□□ 0.44
UPK1AO00322 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 RPS2P55-201ENST00000397318 883 ntBASIC17.78■□□□□ 0.44
UPK1AO00322 AC004951.3-201ENST00000418645 1148 ntBASIC17.78■□□□□ 0.44
UPK1AO00322 AC107956.1-201ENST00000494359 873 ntBASIC17.78■□□□□ 0.44
UPK1AO00322 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
UPK1AO00322 CD177P1-201ENST00000606252 935 ntBASIC17.78■□□□□ 0.44
UPK1AO00322 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.78■□□□□ 0.44
UPK1AO00322 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.78■□□□□ 0.44
UPK1AO00322 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.78■□□□□ 0.44
UPK1AO00322 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.78■□□□□ 0.44
UPK1AO00322 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPK1AO00322 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms