Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.42■□□□□ 0.7
SRRM3A6NNA2 AC091799.1-201ENST00000422823 811 ntBASIC19.42■□□□□ 0.7
SRRM3A6NNA2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.42■□□□□ 0.7
SRRM3A6NNA2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 WWOX-216ENST00000569818 525 ntBASIC19.41■□□□□ 0.7
SRRM3A6NNA2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 AC120498.8-201ENST00000614275 531 ntBASIC19.41■□□□□ 0.7
SRRM3A6NNA2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SRRM3A6NNA2 AC141586.5-201ENST00000624546 2050 ntBASIC19.4■□□□□ 0.7
SRRM3A6NNA2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRRM3A6NNA2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
SRRM3A6NNA2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SRRM3A6NNA2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRRM3A6NNA2 FZD10-202ENST00000539839 3282 ntBASIC19.39■□□□□ 0.69
SRRM3A6NNA2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRRM3A6NNA2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SRRM3A6NNA2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRRM3A6NNA2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.39■□□□□ 0.69
SRRM3A6NNA2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRRM3A6NNA2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms