Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
LRIT2A6NDA9 MIR3180-5-201ENST00000583743 153 ntBASIC17.82■□□□□ 0.44
LRIT2A6NDA9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.82■□□□□ 0.44
LRIT2A6NDA9 AC145285.6-201ENST00000604632 637 ntBASIC17.82■□□□□ 0.44
LRIT2A6NDA9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT2A6NDA9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT2A6NDA9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT2A6NDA9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.82■□□□□ 0.44
LRIT2A6NDA9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRIT2A6NDA9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 FAM87A-204ENST00000613235 858 ntBASIC17.81■□□□□ 0.44
LRIT2A6NDA9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.81■□□□□ 0.44
LRIT2A6NDA9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 KRT18P22-201ENST00000402024 1347 ntBASIC17.8■□□□□ 0.44
LRIT2A6NDA9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LRIT2A6NDA9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 WWOX-216ENST00000569818 525 ntBASIC17.79■□□□□ 0.44
LRIT2A6NDA9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 AC012306.2-201ENST00000609350 630 ntBASIC17.79■□□□□ 0.44
LRIT2A6NDA9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 CR769767.2-201ENST00000622735 460 ntBASIC17.79■□□□□ 0.44
LRIT2A6NDA9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 AL499627.1-201ENST00000569373 2188 ntBASIC17.79■□□□□ 0.44
LRIT2A6NDA9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.79■□□□□ 0.44
LRIT2A6NDA9 AC036111.1-201ENST00000533973 1582 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms