Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC162PA2VCL2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.77■□□□□ 0.59
CCDC162PA2VCL2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 UNC93B2-201ENST00000285383 730 ntBASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 AL355075.4-201ENST00000554988 638 ntBASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 AP005242.2-201ENST00000580065 1175 ntBASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC162PA2VCL2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 MIR4497-201ENST00000583208 89 ntBASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC162PA2VCL2 KRT17P2-201ENST00000300992 1314 ntBASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 AL390955.1-201ENST00000428694 934 ntBASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 TSPY15P-201ENST00000457163 923 ntBASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC162PA2VCL2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CCDC162PA2VCL2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms