Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 AL136038.4-201ENST00000603606 1261 ntBASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 AC010240.3-201ENST00000607688 395 ntBASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 AC079602.3-201ENST00000623931 403 ntBASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 AC034236.2-201ENST00000606662 1610 ntBASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.39■□□□□ 0.7
TRAV19A0A0A6YYK7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV19A0A0A6YYK7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
TRAV19A0A0A6YYK7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TRAV19A0A0A6YYK7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV19A0A0A6YYK7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 AL032819.2-201ENST00000624543 2162 ntBASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.39■□□□□ 0.69
TRAV19A0A0A6YYK7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 HLA-F-220ENST00000434407 884 ntBASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 AFG3L1P-217ENST00000557444 2447 ntBASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 AC011498.5-201ENST00000592027 486 ntBASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 AL391807.1-203ENST00000604392 2365 ntBASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV19A0A0A6YYK7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 ATP5G2P1-201ENST00000433580 426 ntBASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV19A0A0A6YYK7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV19A0A0A6YYK7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV19A0A0A6YYK7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV19A0A0A6YYK7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV19A0A0A6YYK7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRAV19A0A0A6YYK7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms