Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
TSC22D4Q9Y3Q8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TSC22D4Q9Y3Q8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
TSC22D4Q9Y3Q8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.22■■□□□ 1.47
TSC22D4Q9Y3Q8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
TSC22D4Q9Y3Q8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TSC22D4Q9Y3Q8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TSC22D4Q9Y3Q8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
TSC22D4Q9Y3Q8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TSC22D4Q9Y3Q8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TSC22D4Q9Y3Q8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.2■■□□□ 1.46
TSC22D4Q9Y3Q8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.2■■□□□ 1.46
TSC22D4Q9Y3Q8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
TSC22D4Q9Y3Q8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
TSC22D4Q9Y3Q8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
TSC22D4Q9Y3Q8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
TSC22D4Q9Y3Q8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
TSC22D4Q9Y3Q8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.19■■□□□ 1.46
TSC22D4Q9Y3Q8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TSC22D4Q9Y3Q8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TSC22D4Q9Y3Q8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.18■■□□□ 1.46
TSC22D4Q9Y3Q8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.17■■□□□ 1.46
TSC22D4Q9Y3Q8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TSC22D4Q9Y3Q8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TSC22D4Q9Y3Q8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
TSC22D4Q9Y3Q8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
TSC22D4Q9Y3Q8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TSC22D4Q9Y3Q8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
TSC22D4Q9Y3Q8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TSC22D4Q9Y3Q8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
TSC22D4Q9Y3Q8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
TSC22D4Q9Y3Q8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
TSC22D4Q9Y3Q8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
TSC22D4Q9Y3Q8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.15■■□□□ 1.46
TSC22D4Q9Y3Q8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
TSC22D4Q9Y3Q8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.15■■□□□ 1.46
TSC22D4Q9Y3Q8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
TSC22D4Q9Y3Q8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
TSC22D4Q9Y3Q8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TSC22D4Q9Y3Q8 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.14■■□□□ 1.45
TSC22D4Q9Y3Q8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L13-201ENST00000554103 1267 ntBASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L15-201ENST00000611059 1267 ntBASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L23-201ENST00000615195 1269 ntBASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L24-201ENST00000617576 1269 ntBASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L22-201ENST00000618238 1269 ntBASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L20-201ENST00000619712 1269 ntBASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L21-201ENST00000622058 1269 ntBASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L10-201ENST00000622460 1267 ntBASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L25-201ENST00000624915 1269 ntBASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
TSC22D4Q9Y3Q8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
TSC22D4Q9Y3Q8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSC22D4Q9Y3Q8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.12■■□□□ 1.45
TSC22D4Q9Y3Q8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSC22D4Q9Y3Q8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSC22D4Q9Y3Q8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TSC22D4Q9Y3Q8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
TSC22D4Q9Y3Q8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSC22D4Q9Y3Q8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TSC22D4Q9Y3Q8 ZNRF2P2-203ENST00000454624 420 ntBASIC24.11■■□□□ 1.45
TSC22D4Q9Y3Q8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
TSC22D4Q9Y3Q8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TSC22D4Q9Y3Q8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TSC22D4Q9Y3Q8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TSC22D4Q9Y3Q8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.1■■□□□ 1.45
TSC22D4Q9Y3Q8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L11-201ENST00000611504 1267 ntBASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L12-201ENST00000614593 1267 ntBASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 DUX4L14-201ENST00000621227 1267 ntBASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TSC22D4Q9Y3Q8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
TSC22D4Q9Y3Q8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TSC22D4Q9Y3Q8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.08■■□□□ 1.45
TSC22D4Q9Y3Q8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.45
TSC22D4Q9Y3Q8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TSC22D4Q9Y3Q8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
TSC22D4Q9Y3Q8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TSC22D4Q9Y3Q8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
TSC22D4Q9Y3Q8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.07■■□□□ 1.44
TSC22D4Q9Y3Q8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.07■■□□□ 1.44
TSC22D4Q9Y3Q8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TSC22D4Q9Y3Q8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TSC22D4Q9Y3Q8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TSC22D4Q9Y3Q8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
TSC22D4Q9Y3Q8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TSC22D4Q9Y3Q8 AL121749.1-202ENST00000609313 2153 ntBASIC24.05■■□□□ 1.44
TSC22D4Q9Y3Q8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TSC22D4Q9Y3Q8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TSC22D4Q9Y3Q8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TSC22D4Q9Y3Q8 ABHD17AP4-201ENST00000411545 909 ntBASIC24.04■■□□□ 1.44
TSC22D4Q9Y3Q8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms