Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.76■□□□□ 0.91
LIN7CQ9NUP9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LIN7CQ9NUP9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LIN7CQ9NUP9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.75■□□□□ 0.91
LIN7CQ9NUP9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LIN7CQ9NUP9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LIN7CQ9NUP9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LIN7CQ9NUP9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIN7CQ9NUP9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LIN7CQ9NUP9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LIN7CQ9NUP9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.74■□□□□ 0.91
LIN7CQ9NUP9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LIN7CQ9NUP9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.73■□□□□ 0.91
LIN7CQ9NUP9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.73■□□□□ 0.91
LIN7CQ9NUP9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.72■□□□□ 0.91
LIN7CQ9NUP9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LIN7CQ9NUP9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.72■□□□□ 0.91
LIN7CQ9NUP9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.72■□□□□ 0.91
LIN7CQ9NUP9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LIN7CQ9NUP9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.71■□□□□ 0.91
LIN7CQ9NUP9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LIN7CQ9NUP9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LIN7CQ9NUP9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.71■□□□□ 0.91
LIN7CQ9NUP9 DUX4L29-201ENST00000425409 679 ntBASIC20.71■□□□□ 0.91
LIN7CQ9NUP9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.71■□□□□ 0.91
LIN7CQ9NUP9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LIN7CQ9NUP9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.7■□□□□ 0.9
LIN7CQ9NUP9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.7■□□□□ 0.9
LIN7CQ9NUP9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LIN7CQ9NUP9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LIN7CQ9NUP9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 AC018358.1-201ENST00000631079 1402 ntBASIC20.68■□□□□ 0.9
LIN7CQ9NUP9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN7CQ9NUP9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN7CQ9NUP9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN7CQ9NUP9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LIN7CQ9NUP9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LIN7CQ9NUP9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN7CQ9NUP9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LIN7CQ9NUP9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LIN7CQ9NUP9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN7CQ9NUP9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.65■□□□□ 0.9
LIN7CQ9NUP9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LIN7CQ9NUP9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LIN7CQ9NUP9 AC021231.2-201ENST00000594613 730 ntBASIC20.65■□□□□ 0.9
LIN7CQ9NUP9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LIN7CQ9NUP9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LIN7CQ9NUP9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
LIN7CQ9NUP9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LIN7CQ9NUP9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.64■□□□□ 0.89
LIN7CQ9NUP9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LIN7CQ9NUP9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LIN7CQ9NUP9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LIN7CQ9NUP9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.63■□□□□ 0.89
LIN7CQ9NUP9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN7CQ9NUP9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN7CQ9NUP9 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN7CQ9NUP9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN7CQ9NUP9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN7CQ9NUP9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LIN7CQ9NUP9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LIN7CQ9NUP9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LIN7CQ9NUP9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LIN7CQ9NUP9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 AC135983.2-203ENST00000454486 1613 ntBASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LIN7CQ9NUP9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.6■□□□□ 0.89
LIN7CQ9NUP9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LIN7CQ9NUP9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.6■□□□□ 0.89
LIN7CQ9NUP9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.6■□□□□ 0.89
LIN7CQ9NUP9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIN7CQ9NUP9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LIN7CQ9NUP9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LIN7CQ9NUP9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIN7CQ9NUP9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LIN7CQ9NUP9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LIN7CQ9NUP9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LIN7CQ9NUP9 ABHD17AP4-201ENST00000411545 909 ntBASIC20.58■□□□□ 0.89
LIN7CQ9NUP9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.58■□□□□ 0.89
LIN7CQ9NUP9 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.58■□□□□ 0.88
LIN7CQ9NUP9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms